| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919086
Identifier: 117919086
GI number: 117919086
Start: 747044
End: 748138
Strand: Reverse
Name: 117919086
Synonym: Shewana3_0634
Alternate gene names: NA
Gene position: 748138-747044 (Counterclockwise)
Preceding gene: 117919087
Following gene: 117919085
Centisome position: 15.05
GC content: 53.33
Gene sequence:
>1095_bases ATGGTCATTAAAGAAATCTTTACTCCAGATATCGCCATCACTTGGCTGCCATGGGCAGTGCAATACTTCTTTTTAATGGG TTTGGCCTACGCCAGTGTGTGGGTGGCGACCATTCATTTATTTAGTGCGAAACAAACCGATGCCAGACTGCTCAAACTCT GCGCCTGTTTGATGCTTACCGCTGGCATAGTCGCCCCGATTGCGCTGCTTGCTGACCTGCACCAACCGCTGCGGGCATGG CATTTCTATGCCCAAATCAGACCGCATTCGTGGATGTGGTACGGCGCCTTTTTACTGCCGCTATTTTCGGGCACGAGTCT AGTGTTTGCTTGGCTGTTACTGCGCCAATACTTGCCAACTAAAGCCTCGACACCAGGGGAATCGTCCCAAGATTGGGTAA GGCGTATTGCCCAACTTATCCGCCTAGGAGACTGGGATAGTGATAAATGGATCAAGCCAATCGCACTGATTGCTAGCCTA AGCGCCTGCAGTATCGCGCTTTATACCGGAATGGAAACCATGGCGATCAAAGCACGGCCGCTCTGGCACACCTATTGGTT ACCCCCATTGATGGCGACCAGTGCCCTACTCGCCGCCTGCGGCACTCTCGCCCTGCTCAATCGTGTTTTGCACGGTTATC AAGCCAGCACCCAAGACAGGTTGCTGCAATGGGTCAGGGCAAGCTTTGGTCTCTTCACCCTGTGTCTTATCGGCTGGGCC TTATTCGATAAAGGTTCGGCGCACGAAGCGGCGCTGTTATTAGACACCAGCCCAAGCTGGCAACTCGCCGCCATCTGGGT ATTGGTCACCCTCGCTTTGCTAGCATTGGTATTGGCAGTACGCCGCCTCCCCTCGGTATTGATGTTAGTCGTCAGTTTAA CGGCGGTGCATCTGGCATGGGGATTTCGCTGGATTGTACTTATCCAAGCGCAAACTGACCCTAAATACGGCGCGGGCACT TATTTCTATCAATTGCCATGGGGGCCAGAGGGCCTATTGGGTATCGCTGGCACCTTCGGCCTCTGGCTCGCACTGATGGT ACTAGTGTCTGAATTTATTCGCTATCACCCCAACTCTGCCCGTCAGGCCTTGTGA
Upstream 100 bases:
>100_bases AGAGTGTTTTACATCGGCATGAACAGCGCCTTTGAAGATCGCATTAACGGCCAAGCCCCCGTTCGCACCCTACTGACAGA CTCTGGCGAGGAGATCCACC
Downstream 100 bases:
>100_bases GCCACAGCACTTTAATTAAGAGCATTGGCATTAAGAAAAGTTACCGCATTAAGGAGTCCGTAATGGATAAGAGTAAACGT CGTTTTATCAAAGGCGCAGC
Product: polysulfide reductase, NrfD
Products: NA
Alternate protein names: Polysulphide Reductase NrfD; Tetrathionate Reductase Complex Subunit C; Polysulphide Reductase Nrfd
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MVIKEIFTPDIAITWLPWAVQYFFLMGLAYASVWVATIHLFSAKQTDARLLKLCACLMLTAGIVAPIALLADLHQPLRAW HFYAQIRPHSWMWYGAFLLPLFSGTSLVFAWLLLRQYLPTKASTPGESSQDWVRRIAQLIRLGDWDSDKWIKPIALIASL SACSIALYTGMETMAIKARPLWHTYWLPPLMATSALLAACGTLALLNRVLHGYQASTQDRLLQWVRASFGLFTLCLIGWA LFDKGSAHEAALLLDTSPSWQLAAIWVLVTLALLALVLAVRRLPSVLMLVVSLTAVHLAWGFRWIVLIQAQTDPKYGAGT YFYQLPWGPEGLLGIAGTFGLWLALMVLVSEFIRYHPNSARQAL
Sequences:
>Translated_364_residues MVIKEIFTPDIAITWLPWAVQYFFLMGLAYASVWVATIHLFSAKQTDARLLKLCACLMLTAGIVAPIALLADLHQPLRAW HFYAQIRPHSWMWYGAFLLPLFSGTSLVFAWLLLRQYLPTKASTPGESSQDWVRRIAQLIRLGDWDSDKWIKPIALIASL SACSIALYTGMETMAIKARPLWHTYWLPPLMATSALLAACGTLALLNRVLHGYQASTQDRLLQWVRASFGLFTLCLIGWA LFDKGSAHEAALLLDTSPSWQLAAIWVLVTLALLALVLAVRRLPSVLMLVVSLTAVHLAWGFRWIVLIQAQTDPKYGAGT YFYQLPWGPEGLLGIAGTFGLWLALMVLVSEFIRYHPNSARQAL >Mature_364_residues MVIKEIFTPDIAITWLPWAVQYFFLMGLAYASVWVATIHLFSAKQTDARLLKLCACLMLTAGIVAPIALLADLHQPLRAW HFYAQIRPHSWMWYGAFLLPLFSGTSLVFAWLLLRQYLPTKASTPGESSQDWVRRIAQLIRLGDWDSDKWIKPIALIASL SACSIALYTGMETMAIKARPLWHTYWLPPLMATSALLAACGTLALLNRVLHGYQASTQDRLLQWVRASFGLFTLCLIGWA LFDKGSAHEAALLLDTSPSWQLAAIWVLVTLALLALVLAVRRLPSVLMLVVSLTAVHLAWGFRWIVLIQAQTDPKYGAGT YFYQLPWGPEGLLGIAGTFGLWLALMVLVSEFIRYHPNSARQAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40737; Mature: 40737
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKEIFTPDIAITWLPWAVQYFFLMGLAYASVWVATIHLFSAKQTDARLLKLCACLMLT CCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGIVAPIALLADLHQPLRAWHFYAQIRPHSWMWYGAFLLPLFSGTSLVFAWLLLRQYLPT HHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC KASTPGESSQDWVRRIAQLIRLGDWDSDKWIKPIALIASLSACSIALYTGMETMAIKARP CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCC LWHTYWLPPLMATSALLAACGTLALLNRVLHGYQASTQDRLLQWVRASFGLFTLCLIGWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFDKGSAHEAALLLDTSPSWQLAAIWVLVTLALLALVLAVRRLPSVLMLVVSLTAVHLAW HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFRWIVLIQAQTDPKYGAGTYFYQLPWGPEGLLGIAGTFGLWLALMVLVSEFIRYHPNSA CEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH RQAL HCCC >Mature Secondary Structure MVIKEIFTPDIAITWLPWAVQYFFLMGLAYASVWVATIHLFSAKQTDARLLKLCACLMLT CCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGIVAPIALLADLHQPLRAWHFYAQIRPHSWMWYGAFLLPLFSGTSLVFAWLLLRQYLPT HHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC KASTPGESSQDWVRRIAQLIRLGDWDSDKWIKPIALIASLSACSIALYTGMETMAIKARP CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCC LWHTYWLPPLMATSALLAACGTLALLNRVLHGYQASTQDRLLQWVRASFGLFTLCLIGWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFDKGSAHEAALLLDTSPSWQLAAIWVLVTLALLALVLAVRRLPSVLMLVVSLTAVHLAW HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFRWIVLIQAQTDPKYGAGTYFYQLPWGPEGLLGIAGTFGLWLALMVLVSEFIRYHPNSA CEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH RQAL HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA