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The map label for this gene is ydhF [H]

Identifier: 117919012

GI number: 117919012

Start: 652057

End: 652947

Strand: Reverse

Name: ydhF [H]

Synonym: Shewana3_0559

Alternate gene names: 117919012

Gene position: 652947-652057 (Counterclockwise)

Preceding gene: 117919014

Following gene: 117919010

Centisome position: 13.13

GC content: 49.61

Gene sequence:

>891_bases
ATGAGCGGATCCCCTTTTAGTTTTTCAGAGTTTGTTGCCGGCTTTTGGCGAATGCACAGTTGGCAAATGTCACCCGCCGA
ACGGCTTAACCTGATAGAACAATATATAGACCTAGGTGTGACCACTATGGATCACGCCGATATTTATGGCCAATACCAGT
GCGAAACCCTGTTTGGCGAGGCGTTAGCGCTAAAACCCGCCTTAAGACAGCAGATGCAATTGGTCAGCAAATGTGGCATT
AAGCCCGCCTTCGATTGTCGCCCAGAGCGCTACGTAAACCACTACGACACCTCCAAGGCACATATTATTGCCAGTGTGGA
GCAATCACTAAAGCAGCTGAAAACCGATTATTTAGATCTGCTGCTGATCCACAGACCCGATCCTTTAATGGACGCCGATC
AAGTGGCCGAAGCTTTTGCTGACTTAAAACAGGCGGGCAAAGTGCAACACTTTGGTGTATCTAACTTCACCAACACGCAG
TTTTCATTATTGCAGTCGAGATTAGCTGAGCCCTTAGTCACCAATCAAATCGAAATTTCACCGCTAATAATGGCGAGTTT
GCACGATGGTACTCTCGATTTATGTCAGGAGCGGCGCATTCGGCCTATGGCTTGGTCATGTTTGGGCGGCGGTAAGATCT
TTGATAATAACCATCCACAGGCCATTCGCCTGCAACAAACCTTAGCGGTCATCGCCGATGAGATTGGTGCCCAAGATATC
AGCCAAGTGATTTATGCCTGGGTACGGATGTTACCGAGTCGGCCCGTGCCGATTATCGGCAGTGGCAATATCGCGAGGAT
AAAAACGGCGGTGGCCGCACAGTCACTCACCCTAGACAGGCAGCAATGGTTTAGTATCTGGCAAGCATCAACCGGACGCA
GCGTGCCTTAG

Upstream 100 bases:

>100_bases
AGCCATCGAAAGGGTTAATGAGCGATTCCTTAATCTGCATCAAATAAATCGACTCGGGTCCTTTCCCCTACAAAATTCAG
ATTCCCAAAAGAGAAACAAC

Downstream 100 bases:

>100_bases
CGCTGCAAACAACACCAACAAAAACGGCGCCTTAGGCGCCGTTACTCATCATGCTTAAAGCTGCACTTCACCACTGAGGT
GCGGTCTACGACCTTTACTG

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSGSPFSFSEFVAGFWRMHSWQMSPAERLNLIEQYIDLGVTTMDHADIYGQYQCETLFGEALALKPALRQQMQLVSKCGI
KPAFDCRPERYVNHYDTSKAHIIASVEQSLKQLKTDYLDLLLIHRPDPLMDADQVAEAFADLKQAGKVQHFGVSNFTNTQ
FSLLQSRLAEPLVTNQIEISPLIMASLHDGTLDLCQERRIRPMAWSCLGGGKIFDNNHPQAIRLQQTLAVIADEIGAQDI
SQVIYAWVRMLPSRPVPIIGSGNIARIKTAVAAQSLTLDRQQWFSIWQASTGRSVP

Sequences:

>Translated_296_residues
MSGSPFSFSEFVAGFWRMHSWQMSPAERLNLIEQYIDLGVTTMDHADIYGQYQCETLFGEALALKPALRQQMQLVSKCGI
KPAFDCRPERYVNHYDTSKAHIIASVEQSLKQLKTDYLDLLLIHRPDPLMDADQVAEAFADLKQAGKVQHFGVSNFTNTQ
FSLLQSRLAEPLVTNQIEISPLIMASLHDGTLDLCQERRIRPMAWSCLGGGKIFDNNHPQAIRLQQTLAVIADEIGAQDI
SQVIYAWVRMLPSRPVPIIGSGNIARIKTAVAAQSLTLDRQQWFSIWQASTGRSVP
>Mature_295_residues
SGSPFSFSEFVAGFWRMHSWQMSPAERLNLIEQYIDLGVTTMDHADIYGQYQCETLFGEALALKPALRQQMQLVSKCGIK
PAFDCRPERYVNHYDTSKAHIIASVEQSLKQLKTDYLDLLLIHRPDPLMDADQVAEAFADLKQAGKVQHFGVSNFTNTQF
SLLQSRLAEPLVTNQIEISPLIMASLHDGTLDLCQERRIRPMAWSCLGGGKIFDNNHPQAIRLQQTLAVIADEIGAQDIS
QVIYAWVRMLPSRPVPIIGSGNIARIKTAVAAQSLTLDRQQWFSIWQASTGRSVP

Specific function: May function as oxidoreductase (Potential) [H]

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI48994888, Length=290, Percent_Identity=59.3103448275862, Blast_Score=356, Evalue=1e-100,
Organism=Escherichia coli, GI87081735, Length=287, Percent_Identity=24.0418118466899, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786400, Length=252, Percent_Identity=26.984126984127, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788081, Length=219, Percent_Identity=31.9634703196347, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789375, Length=205, Percent_Identity=27.3170731707317, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI87082198, Length=282, Percent_Identity=26.241134751773, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6325169, Length=288, Percent_Identity=25.6944444444444, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6319951, Length=291, Percent_Identity=24.0549828178694, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33217; Mature: 33086

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSPFSFSEFVAGFWRMHSWQMSPAERLNLIEQYIDLGVTTMDHADIYGQYQCETLFGE
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCHHHCCCCHHHHHHHH
ALALKPALRQQMQLVSKCGIKPAFDCRPERYVNHYDTSKAHIIASVEQSLKQLKTDYLDL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE
LLIHRPDPLMDADQVAEAFADLKQAGKVQHFGVSNFTNTQFSLLQSRLAEPLVTNQIEIS
EEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHCCCEEEC
PLIMASLHDGTLDLCQERRIRPMAWSCLGGGKIFDNNHPQAIRLQQTLAVIADEIGAQDI
HHEEECCCCCHHHHHHHCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCHHHH
SQVIYAWVRMLPSRPVPIIGSGNIARIKTAVAAQSLTLDRQQWFSIWQASTGRSVP
HHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGSPFSFSEFVAGFWRMHSWQMSPAERLNLIEQYIDLGVTTMDHADIYGQYQCETLFGE
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCHHHCCCCHHHHHHHH
ALALKPALRQQMQLVSKCGIKPAFDCRPERYVNHYDTSKAHIIASVEQSLKQLKTDYLDL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE
LLIHRPDPLMDADQVAEAFADLKQAGKVQHFGVSNFTNTQFSLLQSRLAEPLVTNQIEIS
EEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHCCCEEEC
PLIMASLHDGTLDLCQERRIRPMAWSCLGGGKIFDNNHPQAIRLQQTLAVIADEIGAQDI
HHEEECCCCCHHHHHHHCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCHHHH
SQVIYAWVRMLPSRPVPIIGSGNIARIKTAVAAQSLTLDRQQWFSIWQASTGRSVP
HHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]