| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918993
Identifier: 117918993
GI number: 117918993
Start: 633170
End: 634525
Strand: Reverse
Name: 117918993
Synonym: Shewana3_0539
Alternate gene names: NA
Gene position: 634525-633170 (Counterclockwise)
Preceding gene: 117918995
Following gene: 117918984
Centisome position: 12.76
GC content: 49.93
Gene sequence:
>1356_bases ATGTCAGAGTCGTTAGCCCAGTATCAAGAAGATTTACGCCGCCTTTCCGATGAGCTTATCCGCATCCAAACGCCGATTAA AATTTTAGATGCCATCAAATGGCCACGGGAAATGGAAGAGCGTTTTCTCTCCAGTAAAGGCACGGTTCTGCCAGCGATTA GCCAAGATTTTTATCAAAAAATTGCCTTGCCCTTCGATCCCGTTAAAACTCAAGCCGAGCTGCTTGACCTAAAACAAGAA ATCCATCGCCGTTTAGGTAAAAAAGACAAGCTGGGTAAGATCTTAGTTGCTAACGTCGATCAATATCGCCTGGTTGTCGA TATGCTAGGCCATCGAGGAACACCCGTCTTTGGTCAGCTGAGCCAAGAACTCTACGGCAGCGCCAGCCACAGACTACATG GCGATCGCCACACCCTACGCCAATTGGGCGATAAACTCAGCTATATCTTCTCCCTGCCCGCCGCAAGGCATATGAATAAG CATCATCCCAAAATCATTAGCGCCCCCGAAGCCGTGAATGTGCTGAGCCAGCGATTGGAAAAATACTTCCACAGTGATGA TATGCGGGTGCGCTTGAGTGACGGGATTGTGTCCGATGCTGCCGTGGGTGGCGATACGGTCAAACTCAACAGCAAAGCCA TGTTCAGCGAGTCAGATCTCAATGTGTACGAAGTCCATGAAGGTTGGGTGCATGTGGGCACCACCCTCAATGGCCGTGCT CAGCCCCATGCTACTTGGCTTAGCGTCGGGTCTCCCCGTGTCGCAGCCACCCAAGAAGGGCTTGCCGTGTTACTCGAAAT GCTCACCCTGAGTTCAAACCCAGGTCGTGCCCGCCGGATTAGCGACCGTGTCGCTGCGGTAGATATGGCGGAAAAGGGGG CGAACTTTATTGAAGTATTCAACTATTTTAGGGAATTAAATCTTAGCGCTAAGGACAGTTATCGGGTCACGCAAAGGGTG TTTCGTGGCGGCATGGTCGAAGGTGGCAGCTTTTTTACCAAAGACATTTCCTATGTGCGCGGCTATGTCGAAAACATCAA CTTTATCCGCAGCGCCATCACATCGGGTTTACCCGAACTGATCCCTATGCTGTTTTTAGGCAAGCTGGCCATCGAAGACA TTCCTGTACTCTATCAAGCTTGCCAAGAAGGGATTCTCACGCCACCTAAGTATTTACCGCCGATGTTCGACAACTTCAGC GGCCTGTATGCTTGGTTTGGTTTCGCCTCAGGATTAGCAGGAATCGATCTGAAAGGGGTGCAACGTCACTTCACCCGCTT ATTTAAAGACGTCCCCAGTATCGACCCAAGCCTAGAGTTACTCGACGACACTGAATTTGATAATAACTCAGATTAA
Upstream 100 bases:
>100_bases CAATATTCAATTGCTTGAAGGGAGAAACCTATAAATGCAGCGGCTTTACCGCTATGATTAAGCTAATTTTTATCGTCCAA GTCGCAACAGGATTACGGGA
Downstream 100 bases:
>100_bases AATCCCATTCACATTGAAGGCTCACAAACAATGTGAGCCTTCAATGTTAAGACTGAGTTTTTAACGCTTAGTTTTCGATT TCGAACCCTTCGCCATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSESLAQYQEDLRRLSDELIRIQTPIKILDAIKWPREMEERFLSSKGTVLPAISQDFYQKIALPFDPVKTQAELLDLKQE IHRRLGKKDKLGKILVANVDQYRLVVDMLGHRGTPVFGQLSQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNK HHPKIISAPEAVNVLSQRLEKYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAEKGANFIEVFNYFRELNLSAKDSYRVTQRV FRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPELIPMLFLGKLAIEDIPVLYQACQEGILTPPKYLPPMFDNFS GLYAWFGFASGLAGIDLKGVQRHFTRLFKDVPSIDPSLELLDDTEFDNNSD
Sequences:
>Translated_451_residues MSESLAQYQEDLRRLSDELIRIQTPIKILDAIKWPREMEERFLSSKGTVLPAISQDFYQKIALPFDPVKTQAELLDLKQE IHRRLGKKDKLGKILVANVDQYRLVVDMLGHRGTPVFGQLSQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNK HHPKIISAPEAVNVLSQRLEKYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAEKGANFIEVFNYFRELNLSAKDSYRVTQRV FRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPELIPMLFLGKLAIEDIPVLYQACQEGILTPPKYLPPMFDNFS GLYAWFGFASGLAGIDLKGVQRHFTRLFKDVPSIDPSLELLDDTEFDNNSD >Mature_450_residues SESLAQYQEDLRRLSDELIRIQTPIKILDAIKWPREMEERFLSSKGTVLPAISQDFYQKIALPFDPVKTQAELLDLKQEI HRRLGKKDKLGKILVANVDQYRLVVDMLGHRGTPVFGQLSQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNKH HPKIISAPEAVNVLSQRLEKYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRAQ PHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAEKGANFIEVFNYFRELNLSAKDSYRVTQRVF RGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPELIPMLFLGKLAIEDIPVLYQACQEGILTPPKYLPPMFDNFSG LYAWFGFASGLAGIDLKGVQRHFTRLFKDVPSIDPSLELLDDTEFDNNSD
Specific function: Unknown
COG id: COG3930
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50698; Mature: 50566
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESLAQYQEDLRRLSDELIRIQTPIKILDAIKWPREMEERFLSSKGTVLPAISQDFYQK CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH IALPFDPVKTQAELLDLKQEIHRRLGKKDKLGKILVANVDQYRLVVDMLGHRGTPVFGQL HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCHHHHH SQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNKHHPKIISAPEAVNVLSQRLE HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCHHHHHHHHHHHH KYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA HHHCCCCCEEEECCCCHHHHCCCCCEEEECCCCEECCCCCCEEEECCCEEEECCEECCCC QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAEKGANFIEVF CCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH NYFRELNLSAKDSYRVTQRVFRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPEL HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IPMLFLGKLAIEDIPVLYQACQEGILTPPKYLPPMFDNFSGLYAWFGFASGLAGIDLKGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCCHHHHHHHHHHHCCCCCCCHHHH QRHFTRLFKDVPSIDPSLELLDDTEFDNNSD HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure SESLAQYQEDLRRLSDELIRIQTPIKILDAIKWPREMEERFLSSKGTVLPAISQDFYQK CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH IALPFDPVKTQAELLDLKQEIHRRLGKKDKLGKILVANVDQYRLVVDMLGHRGTPVFGQL HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCHHHHH SQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNKHHPKIISAPEAVNVLSQRLE HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCHHHHHHHHHHHH KYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA HHHCCCCCEEEECCCCHHHHCCCCCEEEECCCCEECCCCCCEEEECCCEEEECCEECCCC QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAEKGANFIEVF CCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH NYFRELNLSAKDSYRVTQRVFRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPEL HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IPMLFLGKLAIEDIPVLYQACQEGILTPPKYLPPMFDNFSGLYAWFGFASGLAGIDLKGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCCHHHHHHHHHHHCCCCCCCHHHH QRHFTRLFKDVPSIDPSLELLDDTEFDNNSD HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA