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The map label for this gene is yjgR [H]

Identifier: 117918915

GI number: 117918915

Start: 534420

End: 535913

Strand: Reverse

Name: yjgR [H]

Synonym: Shewana3_0459

Alternate gene names: 117918915

Gene position: 535913-534420 (Counterclockwise)

Preceding gene: 117918920

Following gene: 117918914

Centisome position: 10.78

GC content: 52.88

Gene sequence:

>1494_bases
TTGAATACTCTACTCTTAGGTAAAGGTGAGCAACAGGTTCACTTAAATCTTAAATATGCCAACCGCCACGGACTGATCGC
CGGCGCCACAGGGACGGGGAAAACCGTTTCGCTGATGACCCTTGCCGAAGGTTTCTCCCGCCAAGGTGTGCCAGTATTTA
TTACCGACATTAAAGGCGATATCTCTGGGCTTGGCGTTGCCGGCACACCAAACGACAAGCTATTGCAGCGGGCGGCCGAA
ATCGGCATTGAAGATTATCAAACCGAGGCAAATCCCGTGGTTTGCTGGGATCTCGCAGGAGAGCAAGGGCACCCATTACG
CACAACCGTGAGTGAGATGGGGCCGACTTTACTCGGGCGTATTCTCGAACTCAATGACACCCAAAGCAGTATTCTAGATA
TCGTCTTTCAACTGGCTGATGACCAAGGTTTATTGTTACTCGATCTCGACGATCTTCGCGCCATGCTCAACTTAGTCGCC
GATGAACGCAAAGAGGTCTCCGCCAAATACGGGCTTATCAGCGCCCAGTCCCTCGCCGCGATTCAACGTTCGGTCCTCGG
CTTAGAGCGCGATGGTGGCAAAGATTTTTTCGGCGAGCCAGCCCTACAACTCGAAGACTTGATGCGCACTAACTTACAAG
GGCGTGGCATTATCAACCTGTTAGCCGCCAATAAGTTAATCCTGACCCCTAGCCTCTACTCCAGCTTCTTGCTCTGGCTG
CTATCAGAACTGTTTGAAAACCTGCCCGAAGTCGGCGATCTCGATAAACCCAAGTTAGTCTTCTTCATCGATGAGGCGCA
TTTATTGTTTGAAGGCTGCCCAGCAAGTTTGCTTAAACGCATAGAACAAATTATGCGGCTTATTCGCTCCAAGGGCGTTG
GAGTGTATTTTTGCTCGCAATTCCCTGACGATATTCCCAATGAGATCTTAGGTCAGCTCGGTAATCGCATTCAGCATGCC
CTTCGGGCGTATACCCCAAGGGATCAAAAAGCCGTTAAAACCGCGGCAGAGACCTTTGTGCCCAACCCTAAATTGGTGGT
CAGTGAGGTGATATCACAACTCGCCGTGGGGGAAGCTTTAGTCTCGACACTCGCCGAGAAAGGCGTGCCCACTATGGTGG
AACGCGCCCTAATTGCGCCGCCTCGCTGTCGTATGGGGCCCGCAAGCCCAGAGGAGTTAAGCGCCATTAGGGCCAAGAGT
CCCATTGGTGGCAAGTACGATACCTTAATCAACCGAGAGTCCGCCTACGAGCGACTCAATCAGCGGCACGCCGAAGTGGC
CAATGGCGCCAATAGCACCAAAACGGCGAGTACGCCCGCCGCCCAAGAGGCGGAGCAAGGCTGGTTTAGCGAACTGATCT
TTGGCAATAAACGCCGCCAAGGGTTAGCCGAAACACTCTCTAAACAAGCGGCTCGAACCGTGGGTAATCAACTGGGCAAA
CAAATATTGCGCGGACTACTCGGCGGCATACTCGGCAAGTCGACCCGCAGGTAA

Upstream 100 bases:

>100_bases
ACAGATCCACGAAAGGCAAACACTGAGTGATGTTTTTTTATCCACCCATGACCGACGCCCCATTGGTTCATCACGGGGCT
AATTAAGACAAGGACTGCGC

Downstream 100 bases:

>100_bases
CGGCCTAGGCTAAAACCGTGCGCCAAACCGCATATTTTATATACACATTGGCACTACCATTAGCGTGAATTATTCTAAGT
AGTGAGTGGATCTTAGTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFITDIKGDISGLGVAGTPNDKLLQRAAE
IGIEDYQTEANPVVCWDLAGEQGHPLRTTVSEMGPTLLGRILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVA
DERKEVSAKYGLISAQSLAAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPSLYSSFLLWL
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQFPDDIPNEILGQLGNRIQHA
LRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLAVGEALVSTLAEKGVPTMVERALIAPPRCRMGPASPEELSAIRAKS
PIGGKYDTLINRESAYERLNQRHAEVANGANSTKTASTPAAQEAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGK
QILRGLLGGILGKSTRR

Sequences:

>Translated_497_residues
MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFITDIKGDISGLGVAGTPNDKLLQRAAE
IGIEDYQTEANPVVCWDLAGEQGHPLRTTVSEMGPTLLGRILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVA
DERKEVSAKYGLISAQSLAAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPSLYSSFLLWL
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQFPDDIPNEILGQLGNRIQHA
LRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLAVGEALVSTLAEKGVPTMVERALIAPPRCRMGPASPEELSAIRAKS
PIGGKYDTLINRESAYERLNQRHAEVANGANSTKTASTPAAQEAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGK
QILRGLLGGILGKSTRR
>Mature_497_residues
MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFITDIKGDISGLGVAGTPNDKLLQRAAE
IGIEDYQTEANPVVCWDLAGEQGHPLRTTVSEMGPTLLGRILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVA
DERKEVSAKYGLISAQSLAAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPSLYSSFLLWL
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQFPDDIPNEILGQLGNRIQHA
LRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLAVGEALVSTLAEKGVPTMVERALIAPPRCRMGPASPEELSAIRAKS
PIGGKYDTLINRESAYERLNQRHAEVANGANSTKTASTPAAQEAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGK
QILRGLLGGILGKSTRR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=483, Percent_Identity=52.7950310559006, Blast_Score=495, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 54007; Mature: 54007

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFITDIKGD
CCCEEECCCCCEEEEEEEEECCCCEEEECCCCCCEEEHHHHHHHHCCCCCCEEEEECCCC
ISGLGVAGTPNDKLLQRAAEIGIEDYQTEANPVVCWDLAGEQGHPLRTTVSEMGPTLLGR
CCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCHHHHHH
ILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVADERKEVSAKYGLISAQSLAA
HHHCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPSLYSSFLLWL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCEEECHHHHHHHHHHH
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQ
HHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCC
FPDDIPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLAVGEAL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VSTLAEKGVPTMVERALIAPPRCRMGPASPEELSAIRAKSPIGGKYDTLINRESAYERLN
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHH
QRHAEVANGANSTKTASTPAAQEAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGK
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QILRGLLGGILGKSTRR
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFITDIKGD
CCCEEECCCCCEEEEEEEEECCCCEEEECCCCCCEEEHHHHHHHHCCCCCCEEEEECCCC
ISGLGVAGTPNDKLLQRAAEIGIEDYQTEANPVVCWDLAGEQGHPLRTTVSEMGPTLLGR
CCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCHHHHHH
ILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVADERKEVSAKYGLISAQSLAA
HHHCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPSLYSSFLLWL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCEEECHHHHHHHHHHH
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQ
HHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCC
FPDDIPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLAVGEAL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VSTLAEKGVPTMVERALIAPPRCRMGPASPEELSAIRAKSPIGGKYDTLINRESAYERLN
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHH
QRHAEVANGANSTKTASTPAAQEAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGK
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QILRGLLGGILGKSTRR
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]