| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is pspE [C]
Identifier: 117918775
GI number: 117918775
Start: 353816
End: 354139
Strand: Reverse
Name: pspE [C]
Synonym: Shewana3_0318
Alternate gene names: 117918775
Gene position: 354139-353816 (Counterclockwise)
Preceding gene: 117918776
Following gene: 117918774
Centisome position: 7.12
GC content: 48.15
Gene sequence:
>324_bases ATGTTTCAATCTTTACTGGCTAAATTATCTGGTAGCAGCAACGGTGAAAAGTGTTGGCAATTGATTGATCAAGGTGCGCG CGTTATCGATGTGCGCTCACCGGAGGAATTTGCCTCGGGTCATTTGCCTCAGGCCATCAACGTGCCGCTGCCAACGCTCG ACCAATGGTTACATCAGGTTGAAAATAAACAGCATCCCTTTGTGCTTTACTGCGGCGCAGGCATTCGTGCCCAAAAGGGT TGCGATATTTTAAGGGCCAATGGTTTTGAATGTGTGGTTAACGGTGGCTCGCTAAAAGATTTAGTCTGCTGCCAGCCAAG CTAA
Upstream 100 bases:
>100_bases AGTAATGCCGACAAGCCAAGTGCCCAACAGATTGCCGCTTGCGCCCGCCAATCCATTAGAATAAACTTATTGAAACTTTT CTAATCATAGAGGCAAAGCT
Downstream 100 bases:
>100_bases GGCCTAAGCCAAGCAAACCAACTATGCGTGAGGAGGTGCGGATGACAACAAAGTGCCCACGTCCGCCTAGCGGCGAACAA CCGCCTCAGCCCAAAGCGGT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Domain Protein; Rhodanese-Like Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MFQSLLAKLSGSSNGEKCWQLIDQGARVIDVRSPEEFASGHLPQAINVPLPTLDQWLHQVENKQHPFVLYCGAGIRAQKG CDILRANGFECVVNGGSLKDLVCCQPS
Sequences:
>Translated_107_residues MFQSLLAKLSGSSNGEKCWQLIDQGARVIDVRSPEEFASGHLPQAINVPLPTLDQWLHQVENKQHPFVLYCGAGIRAQKG CDILRANGFECVVNGGSLKDLVCCQPS >Mature_107_residues MFQSLLAKLSGSSNGEKCWQLIDQGARVIDVRSPEEFASGHLPQAINVPLPTLDQWLHQVENKQHPFVLYCGAGIRAQKG CDILRANGFECVVNGGSLKDLVCCQPS
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11680; Mature: 11680
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQSLLAKLSGSSNGEKCWQLIDQGARVIDVRSPEEFASGHLPQAINVPLPTLDQWLHQV CHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHH ENKQHPFVLYCGAGIRAQKGCDILRANGFECVVNGGSLKDLVCCQPS CCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEECCCCCEEEECCCC >Mature Secondary Structure MFQSLLAKLSGSSNGEKCWQLIDQGARVIDVRSPEEFASGHLPQAINVPLPTLDQWLHQV CHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHH ENKQHPFVLYCGAGIRAQKGCDILRANGFECVVNGGSLKDLVCCQPS CCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA