| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918722
Identifier: 117918722
GI number: 117918722
Start: 297172
End: 299271
Strand: Reverse
Name: 117918722
Synonym: Shewana3_0265
Alternate gene names: NA
Gene position: 299271-297172 (Counterclockwise)
Preceding gene: 117918729
Following gene: 117918720
Centisome position: 6.02
GC content: 47.48
Gene sequence:
>2100_bases ATGCCAGTTTTGCAAACACTCAAACTTACGGGTGAGAATGAGGCGCTGAAACGTCAAGAGCTTAAACAATACTTCAATCA AACCTGGGCACTCTATGAATCCCTCTTCGAGCGGATAAAGCACGACGAGGCTTATTACGTCAAAGCCGAGCCACTGCGCC ATCCGTTGATTTTTTACTTTGGCCATACCGCCACTTTCTATATCAATAAACTCAAGCTGGGTAAGTATCTCGATGAACGA GTAAATGATCACTTTGAATCTATGTTTGCCATCGGTGTGGATGAAATGTCTTGGGATGACCTCGACGAAACCCACTATCA ATGGCCAAGTGTCGCTGAGGTAAAAACGTATCGGGATCAAGTCAAACAGGTCGTCAATCAACTGATTGATACCATGCCAA TCACACTGCCGATCAGCCAAGACAGTCCCGCTTGGGTCATCTTGATGGGCATAGAACACGAGCGTATTCACCTAGAGACC TCTTCCACCATTATTCGCCAGCTTCCATTAGAGGACGTGAGTGCCAATGCTCAGTGGCCAGAGTGTCAGGATGTTGGCAG CGCCGAGCCAAATCAACTACTTGCCGTGGCGGGTAAAAAAATCACCTTAGGTAAAAAAGAGCAAGACAACACCTATGGCT GGGATAACGAATACGGTAACAAGAGCTTTAAAGTCGCCGACTTTAAAGCCTCAAAGTACTTAGTGAGTAATCAAGAATAC CTAGTCTTTGTCGAAGCGGGGGGCTATCAAACCCAAGACTATTGGAATGAGGAAGGCCAAGCTTGGCTGGCGTATACCCA AGCCCAAATGCCACGCTTTTGGCGTCGCCGCGATGATAAATGGTGGCAACGTAACCTCACCAGCGAAATCCCTTTGCCGC TCAATTGGCCCGTCGAGGTCAATCAACTCGAAGCTAAGGCCTTTTGTAATTGGAAGGCGCGCCAAAGTCAGAGCAATATT CGCCTGCTCACCGAAGCAGAATGGTATATCTTGCGGGAAAATGTACCGAGCGATGCCCCCGATTGGCATGAAGTCCCTGG CAATACCTCGCTGGCTTATTACGCCTCTTCCTGTCCGGTAAACCGCTTTAAACACAATGATTTTTATGACATTGTCGGCA ATGTCTGGCAATGGACCGAAACCGCTATCGACGGTTTTAATGGTTTTGCCGTACATCCGCTCTACGATGATTTTTCGACG CCTACCTTCGATGGCAAACACAATCTGATTAAAGGTGGTTCGTGGATTTCAACGGGCAATGAAGCTATTGCAGCCTCACG CTATGCCTTTAGGCGTCACTTTTATCAACATGCCGGATTCCGTTACGTCGAGTCGTTGCAAAATCCAGAACAGATGGCCG AGGTTAATCTGTACGAAACCGATGAACTGATTTCCCAGTATTTAGAATTCCACTATGGCGCCGAGTACTTTGGTGTACCG AATTTTTGCGTTAATGGGGTACAACAAGCACTCAACGAGATCCAACTCGAGCACACCACCAAGGCCTTAGATATTGGTTG CTCTGTCGGACGCGCCAGTTTTGAGTTAGCCAAAGTGTTCGACCATGTGGATGGCATCGACTTTTCGGCACGCTTTATCC AACAGGCCTACGCTTTGACAGAGCAAGGCGAAAAACGCTACACCATTCGCACCGAGGGAGACTTACAGGAATTCAAGAGC GCCAGCCTTGCTAAACTGGGATACCTTGGCGAAGCTAAAAAAGTCAATTTTATCCAAGGGGATGCCTGCAATCTCAAGCC AATCTACACAGGATACGATTTGGTCTACGCCTCAAATCTAATCGACAGATTGAACGACCCGCAACACTTCCTCACCAATA TTGGGCAACGCATCAATCAAGGGGGATATCTGGTTATCGCCTCACCTTATACTTGGCTCGAAGACCACACGCCAAAGGAG AAATGGCTTGGGGGGATTAAAGTCAAAGGAGAAAACTTCACAACTTTAGATGGGTTAACCGAAACCTTGATAGGCCAATT TGAACTGGTTGCGGTGAAAGAAATCCCCTTCGTTATTCGCGAAACCAAGCGTAAATTCCAGCATTCGATTTCAGAGATGA CGATCTGGCGTAAGCGTTAG
Upstream 100 bases:
>100_bases TTTTGTTGATAGAGTGATCCAATAAACCCGCGCCGCGTATTGAGTCTGACAACCCATAGCCACCACTATGGCACCAGCTT GCCCTATGGAGAAATCGAAT
Downstream 100 bases:
>100_bases TTTTGCAAGATTAATAGCCGCCCTAAAGAAAAATCCGCCAGATAATCCTTTCTGGCGGATGCATAACAAACGGCGAATGC TCGGCACTGCTTACTCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 699; Mature: 698
Protein sequence:
>699_residues MPVLQTLKLTGENEALKRQELKQYFNQTWALYESLFERIKHDEAYYVKAEPLRHPLIFYFGHTATFYINKLKLGKYLDER VNDHFESMFAIGVDEMSWDDLDETHYQWPSVAEVKTYRDQVKQVVNQLIDTMPITLPISQDSPAWVILMGIEHERIHLET SSTIIRQLPLEDVSANAQWPECQDVGSAEPNQLLAVAGKKITLGKKEQDNTYGWDNEYGNKSFKVADFKASKYLVSNQEY LVFVEAGGYQTQDYWNEEGQAWLAYTQAQMPRFWRRRDDKWWQRNLTSEIPLPLNWPVEVNQLEAKAFCNWKARQSQSNI RLLTEAEWYILRENVPSDAPDWHEVPGNTSLAYYASSCPVNRFKHNDFYDIVGNVWQWTETAIDGFNGFAVHPLYDDFST PTFDGKHNLIKGGSWISTGNEAIAASRYAFRRHFYQHAGFRYVESLQNPEQMAEVNLYETDELISQYLEFHYGAEYFGVP NFCVNGVQQALNEIQLEHTTKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALTEQGEKRYTIRTEGDLQEFKS ASLAKLGYLGEAKKVNFIQGDACNLKPIYTGYDLVYASNLIDRLNDPQHFLTNIGQRINQGGYLVIASPYTWLEDHTPKE KWLGGIKVKGENFTTLDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR
Sequences:
>Translated_699_residues MPVLQTLKLTGENEALKRQELKQYFNQTWALYESLFERIKHDEAYYVKAEPLRHPLIFYFGHTATFYINKLKLGKYLDER VNDHFESMFAIGVDEMSWDDLDETHYQWPSVAEVKTYRDQVKQVVNQLIDTMPITLPISQDSPAWVILMGIEHERIHLET SSTIIRQLPLEDVSANAQWPECQDVGSAEPNQLLAVAGKKITLGKKEQDNTYGWDNEYGNKSFKVADFKASKYLVSNQEY LVFVEAGGYQTQDYWNEEGQAWLAYTQAQMPRFWRRRDDKWWQRNLTSEIPLPLNWPVEVNQLEAKAFCNWKARQSQSNI RLLTEAEWYILRENVPSDAPDWHEVPGNTSLAYYASSCPVNRFKHNDFYDIVGNVWQWTETAIDGFNGFAVHPLYDDFST PTFDGKHNLIKGGSWISTGNEAIAASRYAFRRHFYQHAGFRYVESLQNPEQMAEVNLYETDELISQYLEFHYGAEYFGVP NFCVNGVQQALNEIQLEHTTKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALTEQGEKRYTIRTEGDLQEFKS ASLAKLGYLGEAKKVNFIQGDACNLKPIYTGYDLVYASNLIDRLNDPQHFLTNIGQRINQGGYLVIASPYTWLEDHTPKE KWLGGIKVKGENFTTLDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR >Mature_698_residues PVLQTLKLTGENEALKRQELKQYFNQTWALYESLFERIKHDEAYYVKAEPLRHPLIFYFGHTATFYINKLKLGKYLDERV NDHFESMFAIGVDEMSWDDLDETHYQWPSVAEVKTYRDQVKQVVNQLIDTMPITLPISQDSPAWVILMGIEHERIHLETS STIIRQLPLEDVSANAQWPECQDVGSAEPNQLLAVAGKKITLGKKEQDNTYGWDNEYGNKSFKVADFKASKYLVSNQEYL VFVEAGGYQTQDYWNEEGQAWLAYTQAQMPRFWRRRDDKWWQRNLTSEIPLPLNWPVEVNQLEAKAFCNWKARQSQSNIR LLTEAEWYILRENVPSDAPDWHEVPGNTSLAYYASSCPVNRFKHNDFYDIVGNVWQWTETAIDGFNGFAVHPLYDDFSTP TFDGKHNLIKGGSWISTGNEAIAASRYAFRRHFYQHAGFRYVESLQNPEQMAEVNLYETDELISQYLEFHYGAEYFGVPN FCVNGVQQALNEIQLEHTTKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALTEQGEKRYTIRTEGDLQEFKSA SLAKLGYLGEAKKVNFIQGDACNLKPIYTGYDLVYASNLIDRLNDPQHFLTNIGQRINQGGYLVIASPYTWLEDHTPKEK WLGGIKVKGENFTTLDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80909; Mature: 80777
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLQTLKLTGENEALKRQELKQYFNQTWALYESLFERIKHDEAYYVKAEPLRHPLIFYF CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEE GHTATFYINKLKLGKYLDERVNDHFESMFAIGVDEMSWDDLDETHYQWPSVAEVKTYRDQ CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHH VKQVVNQLIDTMPITLPISQDSPAWVILMGIEHERIHLETSSTIIRQLPLEDVSANAQWP HHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCEEEEEHHHHHHHHCCCHHCCCCCCCC ECQDVGSAEPNQLLAVAGKKITLGKKEQDNTYGWDNEYGNKSFKVADFKASKYLVSNQEY CHHCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCE LVFVEAGGYQTQDYWNEEGQAWLAYTQAQMPRFWRRRDDKWWQRNLTSEIPLPLNWPVEV EEEEECCCEECHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC NQLEAKAFCNWKARQSQSNIRLLTEAEWYILRENVPSDAPDWHEVPGNTSLAYYASSCPV CCCCHHHHCCCHHHCCCCCEEEEEECCEEEEECCCCCCCCCHHCCCCCCEEEEEECCCCC NRFKHNDFYDIVGNVWQWTETAIDGFNGFAVHPLYDDFSTPTFDGKHNLIKGGSWISTGN CCCCCCCHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCEECCCC EAIAASRYAFRRHFYQHAGFRYVESLQNPEQMAEVNLYETDELISQYLEFHYGAEYFGVP HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCC NFCVNGVQQALNEIQLEHTTKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EQGEKRYTIRTEGDLQEFKSASLAKLGYLGEAKKVNFIQGDACNLKPIYTGYDLVYASNL HCCCCEEEEEECCCHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHH IDRLNDPQHFLTNIGQRINQGGYLVIASPYTWLEDHTPKEKWLGGIKVKGENFTTLDGLT HHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCEEECCCCCEEHHHHH ETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR HHHHCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PVLQTLKLTGENEALKRQELKQYFNQTWALYESLFERIKHDEAYYVKAEPLRHPLIFYF CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEE GHTATFYINKLKLGKYLDERVNDHFESMFAIGVDEMSWDDLDETHYQWPSVAEVKTYRDQ CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHH VKQVVNQLIDTMPITLPISQDSPAWVILMGIEHERIHLETSSTIIRQLPLEDVSANAQWP HHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCEEEEEHHHHHHHHCCCHHCCCCCCCC ECQDVGSAEPNQLLAVAGKKITLGKKEQDNTYGWDNEYGNKSFKVADFKASKYLVSNQEY CHHCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCE LVFVEAGGYQTQDYWNEEGQAWLAYTQAQMPRFWRRRDDKWWQRNLTSEIPLPLNWPVEV EEEEECCCEECHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC NQLEAKAFCNWKARQSQSNIRLLTEAEWYILRENVPSDAPDWHEVPGNTSLAYYASSCPV CCCCHHHHCCCHHHCCCCCEEEEEECCEEEEECCCCCCCCCHHCCCCCCEEEEEECCCCC NRFKHNDFYDIVGNVWQWTETAIDGFNGFAVHPLYDDFSTPTFDGKHNLIKGGSWISTGN CCCCCCCHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCEECCCC EAIAASRYAFRRHFYQHAGFRYVESLQNPEQMAEVNLYETDELISQYLEFHYGAEYFGVP HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCC NFCVNGVQQALNEIQLEHTTKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EQGEKRYTIRTEGDLQEFKSASLAKLGYLGEAKKVNFIQGDACNLKPIYTGYDLVYASNL HCCCCEEEEEECCCHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHH IDRLNDPQHFLTNIGQRINQGGYLVIASPYTWLEDHTPKEKWLGGIKVKGENFTTLDGLT HHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCEEECCCCCEEHHHHH ETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR HHHHCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA