| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is gltP [H]
Identifier: 117918600
GI number: 117918600
Start: 163107
End: 164336
Strand: Reverse
Name: gltP [H]
Synonym: Shewana3_0142
Alternate gene names: 117918600
Gene position: 164336-163107 (Counterclockwise)
Preceding gene: 117918602
Following gene: 117918599
Centisome position: 3.31
GC content: 51.63
Gene sequence:
>1230_bases ATGAAGAGCAAGAGTTTATTAGGCAACATTGGTGTGCAAGTGGTTATTGCCATGATTATTGGCGCACTGGTTGGTTTTAC CATGGGCGAAAGTGCGAGCATCTTCGCACCACTGGGCACCATTTTTATCCATTTAGTCAAAATGCTAGTGATCCCACTGG TGCTGGTGTCTATCATCAGCGGCGCCGCCAGCCTAGGCGATAGCCCCTCGGCGGGTAAGATTGGTGTCGGCACCTTCGGT TTCTTTATTGTCACCTCGGGGATTGCCGTTGCCTTAGCATTAGTCATGGGCAATATGTTTACCCCCGGCGCGGGTGTCGA CTTTACCGCCCATAGTAGTAGCGGCCTGATGGAAGTCACCGCCGAACATGGCGCACTGCCTGGGGTAATGGATACCTTTA TTGGCATGATCCCAACCAACGTGTTCGAATCGCTGACTGGCGGGAATATCCTTCAAATTCTGGTGTTTAGTATATTTTTC GGTATCGCACTGACCAAGGTCAAAGGCGATGGCGCTAAGCCCATCATGGCAGCGTTAAATACCGTCGTCGACGCCTTTGT GTGGATGATTAACTGTGTGATGGTGATTGCGCCCATTGGGGTGTTTGGCTTGATGGCCGATTCCGTCGGCACCTTCGGTT TCGATGCCTTAGAAGTGGTGTTTAAGTTGTTTGCCGTGTTTGTGGCCGCGATTCTGATCTACGGTTTTGTGTTCTTCCCC TTAGTGGTGCAGCTGTTTTCTAGGGTATCGGCACGCCAATTTATTTCGGCGATGAAAAAACCTCAGGTGATGGCACTGTC GACGGCTTCATCCATGGCGACGCTGCCGGTGAATATGGAAACCTGCGAAGAAGATCTTAAGGTTTCTAAGGCTACAACCG CCTTTGTGCTGCCTTTAGGTGCCACCATCAATATGAGCGGCAACGCGATTTACTATGGTTTAGTCGCCATGTTCTTCGCG CAGATGTACAACGTCGATCTGTCGATGACGGCCTATGCCGCAATTATCTTTACCTCAACCTTAGGCGCCATTGGCCAAGC GGGTGTGCCCGGTCCATCATTTTTAGTGGTTGCCGTGCTACTGGCCGCCGGTATTCCCATTGACGGTTTACCATTGTTAT TCGCCCTCGACCGGGTGTTTGACATGATCCGCACCGCGCTCAACATCACGGGTGACGCCGCCTGCGCCGTGATTATGGAT AAGTACACCGCAGAGCCAAGCTCGAACTAA
Upstream 100 bases:
>100_bases GTCAGGGCTGAGCTTTTACGCCAAAAGCGAGGGCAAGCCTGTAAATAGATAACTAGTCTTAAGACACAAAATGCCGCGGT AACTGGGGAGTTTCGCAAGA
Downstream 100 bases:
>100_bases CTGTGCGAATACATTGATATACCAAGGCTTGAATAGGCTTGCTTATTCAAGCCTTTTTTATGGTTTAAACTTCGAGATAC CGCATCTTATCCCACTGATT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKSKSLLGNIGVQVVIAMIIGALVGFTMGESASIFAPLGTIFIHLVKMLVIPLVLVSIISGAASLGDSPSAGKIGVGTFG FFIVTSGIAVALALVMGNMFTPGAGVDFTAHSSSGLMEVTAEHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFF GIALTKVKGDGAKPIMAALNTVVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFP LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLGATINMSGNAIYYGLVAMFFA QMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMD KYTAEPSSN
Sequences:
>Translated_409_residues MKSKSLLGNIGVQVVIAMIIGALVGFTMGESASIFAPLGTIFIHLVKMLVIPLVLVSIISGAASLGDSPSAGKIGVGTFG FFIVTSGIAVALALVMGNMFTPGAGVDFTAHSSSGLMEVTAEHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFF GIALTKVKGDGAKPIMAALNTVVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFP LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLGATINMSGNAIYYGLVAMFFA QMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMD KYTAEPSSN >Mature_409_residues MKSKSLLGNIGVQVVIAMIIGALVGFTMGESASIFAPLGTIFIHLVKMLVIPLVLVSIISGAASLGDSPSAGKIGVGTFG FFIVTSGIAVALALVMGNMFTPGAGVDFTAHSSSGLMEVTAEHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFF GIALTKVKGDGAKPIMAALNTVVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFP LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLGATINMSGNAIYYGLVAMFFA QMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMD KYTAEPSSN
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=454, Percent_Identity=28.4140969162996, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI21314632, Length=414, Percent_Identity=29.4685990338164, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI5032093, Length=393, Percent_Identity=30.2798982188295, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI66773030, Length=465, Percent_Identity=28.1720430107527, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI4827012, Length=445, Percent_Identity=26.5168539325843, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI223468566, Length=272, Percent_Identity=31.6176470588235, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI40254478, Length=413, Percent_Identity=27.1186440677966, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI223468564, Length=266, Percent_Identity=31.9548872180451, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI262359914, Length=372, Percent_Identity=27.6881720430108, Blast_Score=128, Evalue=7e-30, Organism=Homo sapiens, GI194239697, Length=454, Percent_Identity=26.6519823788546, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI301601644, Length=168, Percent_Identity=35.7142857142857, Blast_Score=102, Evalue=5e-22, Organism=Escherichia coli, GI1790514, Length=415, Percent_Identity=32.7710843373494, Blast_Score=230, Evalue=1e-61, Organism=Escherichia coli, GI1789947, Length=411, Percent_Identity=29.1970802919708, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI1788024, Length=401, Percent_Identity=26.1845386533666, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1789473, Length=377, Percent_Identity=27.8514588859416, Blast_Score=106, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71996953, Length=447, Percent_Identity=27.9642058165548, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193206654, Length=406, Percent_Identity=29.3103448275862, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71983106, Length=450, Percent_Identity=28, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI71983099, Length=450, Percent_Identity=28, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI193206505, Length=402, Percent_Identity=28.3582089552239, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17541374, Length=408, Percent_Identity=29.9019607843137, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17537407, Length=413, Percent_Identity=26.8765133171913, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24583025, Length=447, Percent_Identity=24.6085011185682, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI17137668, Length=447, Percent_Identity=24.6085011185682, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24583023, Length=447, Percent_Identity=24.6085011185682, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI281360483, Length=447, Percent_Identity=26.8456375838926, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17137666, Length=447, Percent_Identity=26.8456375838926, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI281360481, Length=447, Percent_Identity=26.8456375838926, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 42563; Mature: 42563
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKSLLGNIGVQVVIAMIIGALVGFTMGESASIFAPLGTIFIHLVKMLVIPLVLVSIIS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAASLGDSPSAGKIGVGTFGFFIVTSGIAVALALVMGNMFTPGAGVDFTAHSSSGLMEVT HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEH AEHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFFGIALTKVKGDGAKPIMAALN HHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLG HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHEEEEEECC ATINMSGNAIYYGLVAMFFAQMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVL CEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMDKYTAEPSSN HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKSKSLLGNIGVQVVIAMIIGALVGFTMGESASIFAPLGTIFIHLVKMLVIPLVLVSIIS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAASLGDSPSAGKIGVGTFGFFIVTSGIAVALALVMGNMFTPGAGVDFTAHSSSGLMEVT HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEH AEHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFFGIALTKVKGDGAKPIMAALN HHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLG HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHEEEEEECC ATINMSGNAIYYGLVAMFFAQMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVL CEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMDKYTAEPSSN HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]