| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918569
Identifier: 117918569
GI number: 117918569
Start: 127143
End: 128486
Strand: Reverse
Name: 117918569
Synonym: Shewana3_0111
Alternate gene names: NA
Gene position: 128486-127143 (Counterclockwise)
Preceding gene: 117918570
Following gene: 117918557
Centisome position: 2.58
GC content: 50.82
Gene sequence:
>1344_bases ATGGAACAAGCGATTAGCACAGGGAACGACAACCCCATTCAAATGGCCGATACCGTCTATTCGAAAGAAAAGTCACTGTT TGCAATTTTAGCGATTATTTCAGGGCTAATTTGGGCCGTGCTGATCTTAGCCACCAAAGGTCTCGCCCTGATTTATGTGC TGATGTTTTTCATCATTTACCTCTTTACCCACTCGGCGTTTATCAGCTACTTAAAGGGCACGGCGGTTGAAATCAGCCCT GAGCAGTTCCCCGATTTACACAAGCAATACCTCGCCTGCTGCGAGCGTTTAGAGATTAAAGAACCGCCTCGCGCCTACCT GTTAGCCGCCGATGGCATGCTAAATGCCCTCGCCACCCGCTTTCTGCGCCGTAACTACATAGTGCTGTTCTCATCGATCG TGGATGCACTCGAGTCCGATAAAGATGCCCTTAACTTCTATATCGGCCATGAGCTGGGCCATATTCGCCGTAACCATATT GGTAAAGAGCCACTGTTAGTGTTCGCTACTTGGCTGCCGTTAGTCGGCGCAGCCTATGCCCGCGCCTGTGAGTACACCTG CGATCTACACGGTCTGCGTTGCTGCAATAGCCTACGTTCGGCCACCAATGCGGTTGCCGTATTAGCCGCTGGGGTTGAAC AGTGGAAACGGATGAATGTGGATCAATATATTCGCCAAACCCAAGAGTCGAGCGGATTTTGGATGTCCTTCCATGAGCTG AACAGCAGTTATCCATGGCTGACAAAACGTATGGCAAGAGTACAAGCAACCGCACAGGGCAAAATGTATGCAGCGCCTTC TCGTAGTGTATTCGCCTACCTCTTTAGCCTGTTTATGCCACGTATGGGCACAGCGGGCGGCGGGATTATCATCCTTGCGG CCATTATCGGTGTGGCCGCTGCGGTCGCGATTCCCGCATATAAGGAATACCAAGAGAAAGCGGGCGCTGCCAGCATTAAC TATGATGATGCCAACTACGCCACCAGCACCCCGCAAATGGACACTGTACCCGCTAACGTGCCCGATGCTGCACTGGCTAT CGAGCATATAGACCAGTTACATCAATCATTAGCGCCGATTACCGGGGTGCTGGCTCAGTACTACCAAAGCCATAAAGCTT GGCCGACCGAGTTAGAGCCGCTAGGTTTTAGCGATGAGCAGCTAACCACCTTTAACCTTTATTCCGAGGGGATTGTTGGT TTTGTTGCCGGCGAAGCCTTAGGAGATTATCAAGGTTATGAGGTGTATCTATCACCCCAAGTTGACGAGCAAGATAATGT CACTTGGGTATGCAGCAGTAACGGTATTCCCGACGAATATTTACCTGCCGATTGCCAAGGCTAA
Upstream 100 bases:
>100_bases AAAGGTAAATTATCGGTTATTCCAGTTATAGAGATTGAATTTCCTAGTGAAATTGACTATTTTCACGCCGCTTTGTTATT TCACTAGGAAAAGGATCAAC
Downstream 100 bases:
>100_bases GATCAAAAAGCGCTGCCAATGCAGCGCTTTTTATTTGTCTTAATAGCCCTATTCGGATAGCTCAATTAACGCTGGATCAG ATACCGAATCGTTGGCCCGT
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: Zn-Dependent Protease With Chaperone Function; Peptidase M; Ankyrin Repeat-Containing Protein; Zn-Dependent Protease; Protease
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIYLFTHSAFISYLKGTAVEISP EQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATRFLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHI GKEPLLVFATWLPLVGAAYARACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAAAVAIPAYKEYQEKAGAASIN YDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPITGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVG FVAGEALGDYQGYEVYLSPQVDEQDNVTWVCSSNGIPDEYLPADCQG
Sequences:
>Translated_447_residues MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIYLFTHSAFISYLKGTAVEISP EQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATRFLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHI GKEPLLVFATWLPLVGAAYARACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAAAVAIPAYKEYQEKAGAASIN YDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPITGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVG FVAGEALGDYQGYEVYLSPQVDEQDNVTWVCSSNGIPDEYLPADCQG >Mature_447_residues MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIYLFTHSAFISYLKGTAVEISP EQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATRFLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHI GKEPLLVFATWLPLVGAAYARACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAAAVAIPAYKEYQEKAGAASIN YDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPITGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVG FVAGEALGDYQGYEVYLSPQVDEQDNVTWVCSSNGIPDEYLPADCQG
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49390; Mature: 49390
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIY CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LFTHSAFISYLKGTAVEISPEQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATR HHHHHHHHHHHCCCCEEECHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH FLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHIGKEPLLVFATWLPLVGAAYA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHC NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAA CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AVAIPAYKEYQEKAGAASINYDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPI HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVGFVAGEALGDYQGYEVYLSPQ HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHCCCCCEEEEECCC VDEQDNVTWVCSSNGIPDEYLPADCQG CCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIY CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LFTHSAFISYLKGTAVEISPEQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATR HHHHHHHHHHHCCCCEEECHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH FLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHIGKEPLLVFATWLPLVGAAYA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHC NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAA CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AVAIPAYKEYQEKAGAASINYDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPI HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVGFVAGEALGDYQGYEVYLSPQ HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHCCCCCEEEEECCC VDEQDNVTWVCSSNGIPDEYLPADCQG CCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA