Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117918569

Identifier: 117918569

GI number: 117918569

Start: 127143

End: 128486

Strand: Reverse

Name: 117918569

Synonym: Shewana3_0111

Alternate gene names: NA

Gene position: 128486-127143 (Counterclockwise)

Preceding gene: 117918570

Following gene: 117918557

Centisome position: 2.58

GC content: 50.82

Gene sequence:

>1344_bases
ATGGAACAAGCGATTAGCACAGGGAACGACAACCCCATTCAAATGGCCGATACCGTCTATTCGAAAGAAAAGTCACTGTT
TGCAATTTTAGCGATTATTTCAGGGCTAATTTGGGCCGTGCTGATCTTAGCCACCAAAGGTCTCGCCCTGATTTATGTGC
TGATGTTTTTCATCATTTACCTCTTTACCCACTCGGCGTTTATCAGCTACTTAAAGGGCACGGCGGTTGAAATCAGCCCT
GAGCAGTTCCCCGATTTACACAAGCAATACCTCGCCTGCTGCGAGCGTTTAGAGATTAAAGAACCGCCTCGCGCCTACCT
GTTAGCCGCCGATGGCATGCTAAATGCCCTCGCCACCCGCTTTCTGCGCCGTAACTACATAGTGCTGTTCTCATCGATCG
TGGATGCACTCGAGTCCGATAAAGATGCCCTTAACTTCTATATCGGCCATGAGCTGGGCCATATTCGCCGTAACCATATT
GGTAAAGAGCCACTGTTAGTGTTCGCTACTTGGCTGCCGTTAGTCGGCGCAGCCTATGCCCGCGCCTGTGAGTACACCTG
CGATCTACACGGTCTGCGTTGCTGCAATAGCCTACGTTCGGCCACCAATGCGGTTGCCGTATTAGCCGCTGGGGTTGAAC
AGTGGAAACGGATGAATGTGGATCAATATATTCGCCAAACCCAAGAGTCGAGCGGATTTTGGATGTCCTTCCATGAGCTG
AACAGCAGTTATCCATGGCTGACAAAACGTATGGCAAGAGTACAAGCAACCGCACAGGGCAAAATGTATGCAGCGCCTTC
TCGTAGTGTATTCGCCTACCTCTTTAGCCTGTTTATGCCACGTATGGGCACAGCGGGCGGCGGGATTATCATCCTTGCGG
CCATTATCGGTGTGGCCGCTGCGGTCGCGATTCCCGCATATAAGGAATACCAAGAGAAAGCGGGCGCTGCCAGCATTAAC
TATGATGATGCCAACTACGCCACCAGCACCCCGCAAATGGACACTGTACCCGCTAACGTGCCCGATGCTGCACTGGCTAT
CGAGCATATAGACCAGTTACATCAATCATTAGCGCCGATTACCGGGGTGCTGGCTCAGTACTACCAAAGCCATAAAGCTT
GGCCGACCGAGTTAGAGCCGCTAGGTTTTAGCGATGAGCAGCTAACCACCTTTAACCTTTATTCCGAGGGGATTGTTGGT
TTTGTTGCCGGCGAAGCCTTAGGAGATTATCAAGGTTATGAGGTGTATCTATCACCCCAAGTTGACGAGCAAGATAATGT
CACTTGGGTATGCAGCAGTAACGGTATTCCCGACGAATATTTACCTGCCGATTGCCAAGGCTAA

Upstream 100 bases:

>100_bases
AAAGGTAAATTATCGGTTATTCCAGTTATAGAGATTGAATTTCCTAGTGAAATTGACTATTTTCACGCCGCTTTGTTATT
TCACTAGGAAAAGGATCAAC

Downstream 100 bases:

>100_bases
GATCAAAAAGCGCTGCCAATGCAGCGCTTTTTATTTGTCTTAATAGCCCTATTCGGATAGCTCAATTAACGCTGGATCAG
ATACCGAATCGTTGGCCCGT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: Zn-Dependent Protease With Chaperone Function; Peptidase M; Ankyrin Repeat-Containing Protein; Zn-Dependent Protease; Protease

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIYLFTHSAFISYLKGTAVEISP
EQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATRFLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHI
GKEPLLVFATWLPLVGAAYARACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL
NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAAAVAIPAYKEYQEKAGAASIN
YDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPITGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVG
FVAGEALGDYQGYEVYLSPQVDEQDNVTWVCSSNGIPDEYLPADCQG

Sequences:

>Translated_447_residues
MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIYLFTHSAFISYLKGTAVEISP
EQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATRFLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHI
GKEPLLVFATWLPLVGAAYARACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL
NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAAAVAIPAYKEYQEKAGAASIN
YDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPITGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVG
FVAGEALGDYQGYEVYLSPQVDEQDNVTWVCSSNGIPDEYLPADCQG
>Mature_447_residues
MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIYLFTHSAFISYLKGTAVEISP
EQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATRFLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHI
GKEPLLVFATWLPLVGAAYARACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL
NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAAAVAIPAYKEYQEKAGAASIN
YDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPITGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVG
FVAGEALGDYQGYEVYLSPQVDEQDNVTWVCSSNGIPDEYLPADCQG

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49390; Mature: 49390

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIY
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LFTHSAFISYLKGTAVEISPEQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATR
HHHHHHHHHHHCCCCEEECHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH
FLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHIGKEPLLVFATWLPLVGAAYA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHC
NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAA
CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AVAIPAYKEYQEKAGAASINYDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVGFVAGEALGDYQGYEVYLSPQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHCCCCCEEEEECCC
VDEQDNVTWVCSSNGIPDEYLPADCQG
CCCCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQAISTGNDNPIQMADTVYSKEKSLFAILAIISGLIWAVLILATKGLALIYVLMFFIIY
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LFTHSAFISYLKGTAVEISPEQFPDLHKQYLACCERLEIKEPPRAYLLAADGMLNALATR
HHHHHHHHHHHCCCCEEECHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH
FLRRNYIVLFSSIVDALESDKDALNFYIGHELGHIRRNHIGKEPLLVFATWLPLVGAAYA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWKRMNVDQYIRQTQESSGFWMSFHEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHC
NSSYPWLTKRMARVQATAQGKMYAAPSRSVFAYLFSLFMPRMGTAGGGIIILAAIIGVAA
CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AVAIPAYKEYQEKAGAASINYDDANYATSTPQMDTVPANVPDAALAIEHIDQLHQSLAPI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TGVLAQYYQSHKAWPTELEPLGFSDEQLTTFNLYSEGIVGFVAGEALGDYQGYEVYLSPQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHCCCCCEEEEECCC
VDEQDNVTWVCSSNGIPDEYLPADCQG
CCCCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA