| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918554
Identifier: 117918554
GI number: 117918554
Start: 105371
End: 107278
Strand: Reverse
Name: 117918554
Synonym: Shewana3_0095
Alternate gene names: NA
Gene position: 107278-105371 (Counterclockwise)
Preceding gene: 117918557
Following gene: 117918552
Centisome position: 2.16
GC content: 51.47
Gene sequence:
>1908_bases ATGAGTAACCCGATGAAAAGAATAATAAATGCTTTAATGCTGGCCATGTTAGCAACGGGCTGTAGCGATCCAAACCCAAC ACAGACCAATCAAACCGCTGAGCAGGCCAAGGCCGAAAAGGCCGTCCAAGTATTGAGCCTTAAGCAACAACTCGCGCCAA TCACCCAGCGTTATTTTGCCCTTAGACCCGAAATCGCCACCTATTATGGCGTGGCCGAGGATGAAGCAGGCAAGGATGTA CTCTCTAAGCTGACCGATTACAGCCCATCGGGGGAAAATCATCGCCGTAAAGCGCTTAAGGCCATATTAACTGAACTCAA TGCTATCGATGCCAGCCAGCTTAGCGCCTCGGAGCAAGTGAGTTTAGGCTCGATAAAATCTGAAATCGCTGGCGCCCTGC TGCCAGCCGAAACCGTGGCCTATGGCACTATGCTCGGTGAATACGGTGTTTGGTTTTTACCATATGTTGTCAACCACTTA TCTGGATTGCATGTTGAATTTCCGGGGTATATGGAAGATAAGTTTGCGGTCACCACCCCTGAGCAAGCTAAGGCCTATCT CAACCGCTTAACCATGTATCCTGCCGCCATGGGCACAGTTATCGATAAGCTAGATCAAGACGTGCAAATGGGCGTGATCC CACCCGATTTTATTATCGATAAGACTATAGCCGTGTTGCAGCAACAATTAGTGCACCATGCTAATGAACATCCCTTGGTC AGCAGTTTTAAAGCCAAATTAACCGCCGCCCAAGTACCAGAAAGTGAGGCGTTGGTGAACTCAGCCGCCGAACTGGTGGA GACCAAATATTACCCTGCGACGCGCCAGTTGATTTCCGCACTGCAAGCCGTGCGCCTCAAGGCCACCCATGTGGCGGGAC TCGGACACCAACCTCAAGGCGCTAAACTCTACAAGGCGATGATTAAGCACCTCGCCAATTCGGAGATGACCCCAGATGAG ATCCACCAACTTGGATTAGACGAAGTTGCCCGCATTACCACCGAGATGGATGTGTTACTCAAACAAGTGGGTTACCGCAA AGGCACAGTTGGCGAGCGCATGCAGCGATTGCTTAAGGATCCTAAATACATCTACCCCAACACCGCCGAGGGTAAACAGC AATTAATGACGGATATTCACGGCTATCTGACGAAAGTGAACGCCAAATTACCGTTGTGGTTTGGGCTGTTACCGAATCAA GAGGTTGCGGTTGAAGCCGTGCCAGACAGTCGCGCCGCCGCAACCAGCGGTGCATTTTACGATGCGCCTTCTCAAGATGG TTCGCGTAAGGGCACCTTCTGGATAAGCCTGTACGATATGGCGGCGCTGCCCTCCTATTCGCTGCAAACCTTAACCTACC ACGAGACCAATCCCGGCCATCATCTACAGACGCTCATCGGTCTGTCGGATACCTTGCCGCTGCTGAGTACCATTTTTTAC TCTAATGCCGCGGGAGAAGGTTGGGCGCTGTATGCAGAGCGCTTAGCCGCCGAGATGGGCATGTATCAGGATAATCCGAT TAATGACCTTGGCCGCTTGCAGTCTGAGTTACACCGCGCGGTGCGCTTAGTGGTCGATACGGGTATGCATGCCAAGGATT GGAGCCGTGAGAAAGCCATTGATTATGCAGTGGCGACTGAGGGAATACACCTATCTGAAGCCACGGGCGAAATCGAGCGC TATGTGGTTTGGCCGGGGCAAGCCTTAGGTTACAAGCTGGGCGAGCTGAAAATTATCGAATTGCGCACTAAGGCCAAAAA AGCCTTGGGCGATAAGTTTGATATTAAAGTCTTCCACGACAGGCTGCTTGAAAATGGCGCCTTGCCCTTAGATTTATTGG AGCAAAAGATGGATCTGTGGCTCGAATCCGCTAAGGCGGCCAATGCCGCCGCCGAGACCAAGGTGTAA
Upstream 100 bases:
>100_bases AACTGCTAGGATAACCGTTCAAATTTGAGCTTGATCACACTAAACACGGTTTAACGCTTGAGGGGTCTGTTCGATAACGG ATTTGCCTCAATGTCTTTGT
Downstream 100 bases:
>100_bases CTCGGGTAAAACCACTCAAATCATCTCAATATAGGGGCAGCTTAGGCGGCCCCTGTCTTTTTACGGCTCCCTATGCTTTT ACGTTTCAGGTTAATCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSNPMKRIINALMLAMLATGCSDPNPTQTNQTAEQAKAEKAVQVLSLKQQLAPITQRYFALRPEIATYYGVAEDEAGKDV LSKLTDYSPSGENHRRKALKAILTELNAIDASQLSASEQVSLGSIKSEIAGALLPAETVAYGTMLGEYGVWFLPYVVNHL SGLHVEFPGYMEDKFAVTTPEQAKAYLNRLTMYPAAMGTVIDKLDQDVQMGVIPPDFIIDKTIAVLQQQLVHHANEHPLV SSFKAKLTAAQVPESEALVNSAAELVETKYYPATRQLISALQAVRLKATHVAGLGHQPQGAKLYKAMIKHLANSEMTPDE IHQLGLDEVARITTEMDVLLKQVGYRKGTVGERMQRLLKDPKYIYPNTAEGKQQLMTDIHGYLTKVNAKLPLWFGLLPNQ EVAVEAVPDSRAAATSGAFYDAPSQDGSRKGTFWISLYDMAALPSYSLQTLTYHETNPGHHLQTLIGLSDTLPLLSTIFY SNAAGEGWALYAERLAAEMGMYQDNPINDLGRLQSELHRAVRLVVDTGMHAKDWSREKAIDYAVATEGIHLSEATGEIER YVVWPGQALGYKLGELKIIELRTKAKKALGDKFDIKVFHDRLLENGALPLDLLEQKMDLWLESAKAANAAAETKV
Sequences:
>Translated_635_residues MSNPMKRIINALMLAMLATGCSDPNPTQTNQTAEQAKAEKAVQVLSLKQQLAPITQRYFALRPEIATYYGVAEDEAGKDV LSKLTDYSPSGENHRRKALKAILTELNAIDASQLSASEQVSLGSIKSEIAGALLPAETVAYGTMLGEYGVWFLPYVVNHL SGLHVEFPGYMEDKFAVTTPEQAKAYLNRLTMYPAAMGTVIDKLDQDVQMGVIPPDFIIDKTIAVLQQQLVHHANEHPLV SSFKAKLTAAQVPESEALVNSAAELVETKYYPATRQLISALQAVRLKATHVAGLGHQPQGAKLYKAMIKHLANSEMTPDE IHQLGLDEVARITTEMDVLLKQVGYRKGTVGERMQRLLKDPKYIYPNTAEGKQQLMTDIHGYLTKVNAKLPLWFGLLPNQ EVAVEAVPDSRAAATSGAFYDAPSQDGSRKGTFWISLYDMAALPSYSLQTLTYHETNPGHHLQTLIGLSDTLPLLSTIFY SNAAGEGWALYAERLAAEMGMYQDNPINDLGRLQSELHRAVRLVVDTGMHAKDWSREKAIDYAVATEGIHLSEATGEIER YVVWPGQALGYKLGELKIIELRTKAKKALGDKFDIKVFHDRLLENGALPLDLLEQKMDLWLESAKAANAAAETKV >Mature_634_residues SNPMKRIINALMLAMLATGCSDPNPTQTNQTAEQAKAEKAVQVLSLKQQLAPITQRYFALRPEIATYYGVAEDEAGKDVL SKLTDYSPSGENHRRKALKAILTELNAIDASQLSASEQVSLGSIKSEIAGALLPAETVAYGTMLGEYGVWFLPYVVNHLS GLHVEFPGYMEDKFAVTTPEQAKAYLNRLTMYPAAMGTVIDKLDQDVQMGVIPPDFIIDKTIAVLQQQLVHHANEHPLVS SFKAKLTAAQVPESEALVNSAAELVETKYYPATRQLISALQAVRLKATHVAGLGHQPQGAKLYKAMIKHLANSEMTPDEI HQLGLDEVARITTEMDVLLKQVGYRKGTVGERMQRLLKDPKYIYPNTAEGKQQLMTDIHGYLTKVNAKLPLWFGLLPNQE VAVEAVPDSRAAATSGAFYDAPSQDGSRKGTFWISLYDMAALPSYSLQTLTYHETNPGHHLQTLIGLSDTLPLLSTIFYS NAAGEGWALYAERLAAEMGMYQDNPINDLGRLQSELHRAVRLVVDTGMHAKDWSREKAIDYAVATEGIHLSEATGEIERY VVWPGQALGYKLGELKIIELRTKAKKALGDKFDIKVFHDRLLENGALPLDLLEQKMDLWLESAKAANAAAETKV
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69928; Mature: 69797
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPMKRIINALMLAMLATGCSDPNPTQTNQTAEQAKAEKAVQVLSLKQQLAPITQRYFA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRPEIATYYGVAEDEAGKDVLSKLTDYSPSGENHRRKALKAILTELNAIDASQLSASEQV HCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHH SLGSIKSEIAGALLPAETVAYGTMLGEYGVWFLPYVVNHLSGLHVEFPGYMEDKFAVTTP HHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCCEEECCH EQAKAYLNRLTMYPAAMGTVIDKLDQDVQMGVIPPDFIIDKTIAVLQQQLVHHANEHPLV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHH SSFKAKLTAAQVPESEALVNSAAELVETKYYPATRQLISALQAVRLKATHVAGLGHQPQG HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AKLYKAMIKHLANSEMTPDEIHQLGLDEVARITTEMDVLLKQVGYRKGTVGERMQRLLKD HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC PKYIYPNTAEGKQQLMTDIHGYLTKVNAKLPLWFGLLPNQEVAVEAVPDSRAAATSGAFY CCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHCCCCCC DAPSQDGSRKGTFWISLYDMAALPSYSLQTLTYHETNPGHHLQTLIGLSDTLPLLSTIFY CCCCCCCCCCCEEEEEEEHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHH SNAAGEGWALYAERLAAEMGMYQDNPINDLGRLQSELHRAVRLVVDTGMHAKDWSREKAI CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DYAVATEGIHLSEATGEIERYVVWPGQALGYKLGELKIIELRTKAKKALGDKFDIKVFHD HHHHHCCCCEECCCCCCCEEEEECCCHHHCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHH RLLENGALPLDLLEQKMDLWLESAKAANAAAETKV HHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure SNPMKRIINALMLAMLATGCSDPNPTQTNQTAEQAKAEKAVQVLSLKQQLAPITQRYFA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRPEIATYYGVAEDEAGKDVLSKLTDYSPSGENHRRKALKAILTELNAIDASQLSASEQV HCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHH SLGSIKSEIAGALLPAETVAYGTMLGEYGVWFLPYVVNHLSGLHVEFPGYMEDKFAVTTP HHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCCEEECCH EQAKAYLNRLTMYPAAMGTVIDKLDQDVQMGVIPPDFIIDKTIAVLQQQLVHHANEHPLV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHH SSFKAKLTAAQVPESEALVNSAAELVETKYYPATRQLISALQAVRLKATHVAGLGHQPQG HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AKLYKAMIKHLANSEMTPDEIHQLGLDEVARITTEMDVLLKQVGYRKGTVGERMQRLLKD HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC PKYIYPNTAEGKQQLMTDIHGYLTKVNAKLPLWFGLLPNQEVAVEAVPDSRAAATSGAFY CCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHCCCCCC DAPSQDGSRKGTFWISLYDMAALPSYSLQTLTYHETNPGHHLQTLIGLSDTLPLLSTIFY CCCCCCCCCCCEEEEEEEHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHH SNAAGEGWALYAERLAAEMGMYQDNPINDLGRLQSELHRAVRLVVDTGMHAKDWSREKAI CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DYAVATEGIHLSEATGEIERYVVWPGQALGYKLGELKIIELRTKAKKALGDKFDIKVFHD HHHHHCCCCEECCCCCCCEEEEECCCHHHCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHH RLLENGALPLDLLEQKMDLWLESAKAANAAAETKV HHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA