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The map label for this gene is insF7 [C]

Identifier: 117918551

GI number: 117918551

Start: 103361

End: 104164

Strand: Reverse

Name: insF7 [C]

Synonym: Shewana3_0092

Alternate gene names: 117918551

Gene position: 104164-103361 (Counterclockwise)

Preceding gene: 117918552

Following gene: 117918548

Centisome position: 2.09

GC content: 45.77

Gene sequence:

>804_bases
ATGTCTAGGCAAGGTATTTATCAGGCAGTTGCTCGAATGGAAAGTCGTAGAGCTGAGCTATCGGTCATCAAAGACTGGGT
CCAGTACTGGCGTAAATATATGCCAAGGTTAGGGGCCCGTAAGCTCTACACGTTGATAAAATCCAAGCTGGTTGAGCACG
ATATTAAACTCGGGCGAGATGGGTTCTTTACCTATTTGAGAAGTGAAGGTTTACTGGTTAAACCGAAGAAAAGCTACACA
AAAACCACGTTCAGCAAACACTGGATGAAGAAGCATCCTAATCTGCTGAAAGAGGAAGGACTGCATGATGCAGGGCATGT
ACTGGTCAGTGATATCACCTATATTGAGTCAGACCAAGGTGTGCACTACCTGTCACTGGTCACCGATGCCAGTTCTCGTA
AGATAGTCGGTCATCACGTGAGTAAAGACATGAAAGCCGAGAGTGTGGTGAAAGCGTTAAAAATGGCCATCAAAGATAAG
CGCTATATCGGCAACGCGGTGCATCACTCAGACAGAGGCTTACAGTACTGCTCAGCCGTTTATCAGAATGCGCTTCAGGC
GAGCCAAATCCAGCCGTCAATGACGGATGGTTATGATTGCTACCAAAATGCATTAGCAGAAAGAGTGAATGGCATACTGA
AGCAGGAGTTTTTACTGCACCGATGTAGGACATTTGCGGAGCTGAAGATACTTGTTAGAGAATCGATAGCAATATACAAC
AATATGAGACCGCATCTGAGTTTGAATATGGACTCCCCTAATCAGGCGCACAATAGAAAAGGCCAGCTACTGGAGCTGGC
CTAA

Upstream 100 bases:

>100_bases
AATATGGAGCAGGCCTCAGAAAAAAGTACTTATCCGGTACGTCTGGCAAGCAAAAAGCAACGGCGAAATAACCCTCGCTG
CCGCATGTCGTGCTGCGGGT

Downstream 100 bases:

>100_bases
AAACTGTCAACCTATCTTAGGACGAGACATGGCAGGCATCCAAAATAACACTAATGCCAGTGCGCCCGCGGTAATATGCA
CAAATTGCGACAGGGTGAAA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSRQGIYQAVARMESRRAELSVIKDWVQYWRKYMPRLGARKLYTLIKSKLVEHDIKLGRDGFFTYLRSEGLLVKPKKSYT
KTTFSKHWMKKHPNLLKEEGLHDAGHVLVSDITYIESDQGVHYLSLVTDASSRKIVGHHVSKDMKAESVVKALKMAIKDK
RYIGNAVHHSDRGLQYCSAVYQNALQASQIQPSMTDGYDCYQNALAERVNGILKQEFLLHRCRTFAELKILVRESIAIYN
NMRPHLSLNMDSPNQAHNRKGQLLELA

Sequences:

>Translated_267_residues
MSRQGIYQAVARMESRRAELSVIKDWVQYWRKYMPRLGARKLYTLIKSKLVEHDIKLGRDGFFTYLRSEGLLVKPKKSYT
KTTFSKHWMKKHPNLLKEEGLHDAGHVLVSDITYIESDQGVHYLSLVTDASSRKIVGHHVSKDMKAESVVKALKMAIKDK
RYIGNAVHHSDRGLQYCSAVYQNALQASQIQPSMTDGYDCYQNALAERVNGILKQEFLLHRCRTFAELKILVRESIAIYN
NMRPHLSLNMDSPNQAHNRKGQLLELA
>Mature_266_residues
SRQGIYQAVARMESRRAELSVIKDWVQYWRKYMPRLGARKLYTLIKSKLVEHDIKLGRDGFFTYLRSEGLLVKPKKSYTK
TTFSKHWMKKHPNLLKEEGLHDAGHVLVSDITYIESDQGVHYLSLVTDASSRKIVGHHVSKDMKAESVVKALKMAIKDKR
YIGNAVHHSDRGLQYCSAVYQNALQASQIQPSMTDGYDCYQNALAERVNGILKQEFLLHRCRTFAELKILVRESIAIYNN
MRPHLSLNMDSPNQAHNRKGQLLELA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=190, Percent_Identity=33.6842105263158, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI1788405, Length=231, Percent_Identity=30.7359307359307, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787263, Length=231, Percent_Identity=30.7359307359307, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786753, Length=231, Percent_Identity=30.7359307359307, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786570, Length=231, Percent_Identity=30.7359307359307, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786490, Length=231, Percent_Identity=30.7359307359307, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789981, Length=152, Percent_Identity=32.8947368421053, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30761; Mature: 30630

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCEEECCCCCCHHHCCCCCEEECC
>Mature Secondary Structure 
SRQGIYQAVARMESRRAELSVIKDWVQYWRKYMPRLGARKLYTLIKSKLVEHDIKLGRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GFFTYLRSEGLLVKPKKSYTKTTFSKHWMKKHPNLLKEEGLHDAGHVLVSDITYIESDQG
HHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHEECCCC
VHYLSLVTDASSRKIVGHHVSKDMKAESVVKALKMAIKDKRYIGNAVHHSDRGLQYCSAV
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
YQNALQASQIQPSMTDGYDCYQNALAERVNGILKQEFLLHRCRTFAELKILVRESIAIYN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NMRPHLSLNMDSPNQAHNRKGQLLELA
CCCCCEEECCCCCCHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]