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The map label for this gene is 117676328

Identifier: 117676328

GI number: 117676328

Start: 277887

End: 278324

Strand: Direct

Name: 117676328

Synonym: Shewana3_4391

Alternate gene names: NA

Gene position: 277887-278324 (Clockwise)

Preceding gene: 117676326

Following gene: 117676080

Centisome position: 99.62

GC content: 43.15

Gene sequence:

>438_bases
ATGCGTACCCGAAATGACCGACTGCGACATGCTATGGGCTTTGAATTTTTTGCACTGCTGATTGCCACTCCATTGGCAAG
CTGGTTCACTGGTGTTGGACTAAGCCATATGAGCTTATTAGCGCTTTTCCTCTCGCTGTTAGCAACAGTCTGGAATTATA
TCTATAACATTGTGTTTGACCATTTTCTAATTAAATATCAGGGTAATAGTCATAAGAATTTGAGTCAAAGGGTACTACAC
ACCTTCTGTTTTGAGGGGGGATTGCTTATTGTTGCGCTTCCCGTCATGTCTTGGTGGCTGAACATCAGCATGCTGGAGGC
TCTAATGCTGGATCTGGGCTTCGTGGCTTTCTACTTAGTCTATGCTTTTGTTTATAACTGGGTTTACGACAAGATGTTTC
CTATTCCACAGGAAGGAACCAAGGCAATGTCACATTAG

Upstream 100 bases:

>100_bases
CTCAATCTATCTGTTTCAACGATAGATACTAACATGTTCGTATCAGTAAATAGAGGTACATTGGCTTCACTTCCATAAAA
CCTGATTGAGAATATTAGTT

Downstream 100 bases:

>100_bases
GTCTTAAACTAAATGCTTAAATCCAGTAATAATGAATAATGTGTTGCATTACAAAATTAAGCCAGCCAACTCTGTACAAC
AGCGTGACGAAAGGCTTCTT

Product: transmembrane pair domain-containing protein

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Protein; Transmembrane Pair Family Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRTRNDRLRHAMGFEFFALLIATPLASWFTGVGLSHMSLLALFLSLLATVWNYIYNIVFDHFLIKYQGNSHKNLSQRVLH
TFCFEGGLLIVALPVMSWWLNISMLEALMLDLGFVAFYLVYAFVYNWVYDKMFPIPQEGTKAMSH

Sequences:

>Translated_145_residues
MRTRNDRLRHAMGFEFFALLIATPLASWFTGVGLSHMSLLALFLSLLATVWNYIYNIVFDHFLIKYQGNSHKNLSQRVLH
TFCFEGGLLIVALPVMSWWLNISMLEALMLDLGFVAFYLVYAFVYNWVYDKMFPIPQEGTKAMSH
>Mature_145_residues
MRTRNDRLRHAMGFEFFALLIATPLASWFTGVGLSHMSLLALFLSLLATVWNYIYNIVFDHFLIKYQGNSHKNLSQRVLH
TFCFEGGLLIVALPVMSWWLNISMLEALMLDLGFVAFYLVYAFVYNWVYDKMFPIPQEGTKAMSH

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16837; Mature: 16837

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRNDRLRHAMGFEFFALLIATPLASWFTGVGLSHMSLLALFLSLLATVWNYIYNIVFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFLIKYQGNSHKNLSQRVLHTFCFEGGLLIVALPVMSWWLNISMLEALMLDLGFVAFYLV
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAFVYNWVYDKMFPIPQEGTKAMSH
HHHHHHHHHHHCCCCCCHHHHHCCC
>Mature Secondary Structure
MRTRNDRLRHAMGFEFFALLIATPLASWFTGVGLSHMSLLALFLSLLATVWNYIYNIVFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFLIKYQGNSHKNLSQRVLHTFCFEGGLLIVALPVMSWWLNISMLEALMLDLGFVAFYLV
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAFVYNWVYDKMFPIPQEGTKAMSH
HHHHHHHHHHHCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA