| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676320
Identifier: 117676320
GI number: 117676320
Start: 268551
End: 269246
Strand: Reverse
Name: 117676320
Synonym: Shewana3_4383
Alternate gene names: NA
Gene position: 269246-268551 (Counterclockwise)
Preceding gene: 117676321
Following gene: 117676319
Centisome position: 96.52
GC content: 43.1
Gene sequence:
>696_bases ATGCCAAATAAGCTATTAAACATCAGCTTGTTGCTGATGGTTGGATTAATAGGTTTGGTGAGTATTGATGTCATGGCACA TGGGGTGGACGACAATACTCGCGCCTTTTTAGAACAAAACCAAGGCGTGCAATTTATCCCCTTTTTGTACATTGGGGCGA AGCACATGATCACGGGCTACGACCACTTATTGTTTCTCGTGGGTGTGATCTTCTTTTTGTACCGCAGCAAAGATGTGCTG TTGTATGTGACCATGTTTACCCTAGGTCACAGCACCACATTATTGCTTGGTGTAATGACCGATTTGCAAGTTAACGCCTA TCTTATCGATGCGATTATTGGCTTATCAGTGATCTATAAAGGTTTTGATAACTTGGGGGGATTTAAGCGCTGCTTTAATT GGCAACCCAATACCAAAATAGCAGTGTTGGTCTTTGGTTTGTTCCATGGCTTTGGACTGGCAACCAAATTACAGGAGTTT CAGTTGTCACAGGAAGGCCTATTTACCAATTTATTAGCATTCAATATTGGGGTGGAGATCGGACAATTTGCTGCGCTGGC CATCATCTTGATTGTGATAAATGCCTGGCGTCATTTCCCTTCATTTCAACGATTTTCAACGCTGACTAACACCGCTCTGA TGAGTGTAGGGGTGATGCTGATGGGTTATCAGCTCACAGGCTATTTCGTCAACTAA
Upstream 100 bases:
>100_bases TCAACCCTGTTAACGCTGTTTGTTATTCCAGCGTTATATCGCATTTTACATAAAGAAAAGGAGTCGATTTTGACTGAAGT TGAAGTAATGGAGATTGCCG
Downstream 100 bases:
>100_bases ACGATTATAAGAGAAGATTATGCAACACACTGTAAGTTCAAAAATCTTGGTCAAAGCGAGCGTATCGGCAACGGTAGTGG CGGCCATTGCGCTGGTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPNKLLNISLLLMVGLIGLVSIDVMAHGVDDNTRAFLEQNQGVQFIPFLYIGAKHMITGYDHLLFLVGVIFFLYRSKDVL LYVTMFTLGHSTTLLLGVMTDLQVNAYLIDAIIGLSVIYKGFDNLGGFKRCFNWQPNTKIAVLVFGLFHGFGLATKLQEF QLSQEGLFTNLLAFNIGVEIGQFAALAIILIVINAWRHFPSFQRFSTLTNTALMSVGVMLMGYQLTGYFVN
Sequences:
>Translated_231_residues MPNKLLNISLLLMVGLIGLVSIDVMAHGVDDNTRAFLEQNQGVQFIPFLYIGAKHMITGYDHLLFLVGVIFFLYRSKDVL LYVTMFTLGHSTTLLLGVMTDLQVNAYLIDAIIGLSVIYKGFDNLGGFKRCFNWQPNTKIAVLVFGLFHGFGLATKLQEF QLSQEGLFTNLLAFNIGVEIGQFAALAIILIVINAWRHFPSFQRFSTLTNTALMSVGVMLMGYQLTGYFVN >Mature_230_residues PNKLLNISLLLMVGLIGLVSIDVMAHGVDDNTRAFLEQNQGVQFIPFLYIGAKHMITGYDHLLFLVGVIFFLYRSKDVLL YVTMFTLGHSTTLLLGVMTDLQVNAYLIDAIIGLSVIYKGFDNLGGFKRCFNWQPNTKIAVLVFGLFHGFGLATKLQEFQ LSQEGLFTNLLAFNIGVEIGQFAALAIILIVINAWRHFPSFQRFSTLTNTALMSVGVMLMGYQLTGYFVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25776; Mature: 25645
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKLLNISLLLMVGLIGLVSIDVMAHGVDDNTRAFLEQNQGVQFIPFLYIGAKHMITGY CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEHHHHCCHHHHHHHH DHLLFLVGVIFFLYRSKDVLLYVTMFTLGHSTTLLLGVMTDLQVNAYLIDAIIGLSVIYK HHHHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFDNLGGFKRCFNWQPNTKIAVLVFGLFHGFGLATKLQEFQLSQEGLFTNLLAFNIGVEI HHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCH GQFAALAIILIVINAWRHFPSFQRFSTLTNTALMSVGVMLMGYQLTGYFVN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC >Mature Secondary Structure PNKLLNISLLLMVGLIGLVSIDVMAHGVDDNTRAFLEQNQGVQFIPFLYIGAKHMITGY CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEHHHHCCHHHHHHHH DHLLFLVGVIFFLYRSKDVLLYVTMFTLGHSTTLLLGVMTDLQVNAYLIDAIIGLSVIYK HHHHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFDNLGGFKRCFNWQPNTKIAVLVFGLFHGFGLATKLQEFQLSQEGLFTNLLAFNIGVEI HHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCH GQFAALAIILIVINAWRHFPSFQRFSTLTNTALMSVGVMLMGYQLTGYFVN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA