Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

Click here to switch to the map view.

The map label for this gene is 117676316

Identifier: 117676316

GI number: 117676316

Start: 266060

End: 266965

Strand: Direct

Name: 117676316

Synonym: Shewana3_4379

Alternate gene names: NA

Gene position: 266060-266965 (Clockwise)

Preceding gene: 117676315

Following gene: 117676326

Centisome position: 95.38

GC content: 46.47

Gene sequence:

>906_bases
ATGAACCTAATCCCCTTCGGCCTTCGTAGTGATGGCTTGTATATAGATGCAGAGGACGCAACGCGGGGTAAGTCCTGTGA
TTGTACTTGCCCATCATGCGGTATTGCCTTAATCGCACGGCAGGGTGACGTTAATGCGTTCCACTTTGCCCATGACTCCA
AAGGTGCGAGTAAGGAAGAGATTGAGGCCTGCAAATACTCGTTTTATGTCTCAGTTCGCTACATGCTGAAGCAGCTTCTA
CAGGGGACAGGCTTGTTATTGTTGCCACCTCTCGAGATTGACCATCACGGCCAAACGCACGTCATTACCAAAAGTTTGCC
AATCACGGTGGAGCCCAAGGACATAACGCCTGATAGTTATGAGCAGGATATTATGTTTGACTTAATCTTTACGGTCTCAG
GCCGCAAGCTATGCCTATACATTAGCCATCCTGGTCGCCCCGCGCCGATATATAACAATCTATCAAGAGATCAGCACACG
GCGGTACTAGGGCTTGATTTAATTCCTTTCTCAAAGATATTTAATGAGTTTTACAAACTAAAATCAGCTCAAACACTACT
GCGCGAATGGCTTGAAACGTCCATTAAGGGCAAGCATTGGATTTACAATCCAAGGCGCAATGCGTGGTTTGAGCATCAAC
AGGCTAAGGCTCCAGCTGTTCAGGAGCAGCAACAGCAACAAGTTCTGGTACAAACCAAGACTACCCGTGATCGGATTAAA
GAGCAGATTGCCAAAATGGACAGGTTGAACGTAGTCGCTATATATCGCTGCGTTTTTTGTCAGTTGGACTTTGAAGGCAG
TGCGTTACTCAACTACTGCCCCAAGTGTAATGACCATCTAAGTGTGAAAAGAAAATCGGAGATTGCGGCTCAAACTCCAC
CTAAAGGCAAGTATCGGTATCGATGA

Upstream 100 bases:

>100_bases
ATAAAACTCTTCGACAAGTTCAGGATGAAATGGGTGCATCCCGCGTTAATATCGGACCGATCCTTCAAGAAGGCTTAAAA
CTTTGTAAGTAGCTTACCTT

Downstream 100 bases:

>100_bases
CTCTATGATTTATTCAAGTAACGTCAACTTATAGCCAAGCGGTGTAAACCAATGCCTACGGCCCGTGTCTAAATTGCGAA
CAAAATACCAATCTTCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEEIEACKYSFYVSVRYMLKQLL
QGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSYEQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHT
AVLGLDLIPFSKIFNEFYKLKSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK
EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRYR

Sequences:

>Translated_301_residues
MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEEIEACKYSFYVSVRYMLKQLL
QGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSYEQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHT
AVLGLDLIPFSKIFNEFYKLKSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK
EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRYR
>Mature_301_residues
MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEEIEACKYSFYVSVRYMLKQLL
QGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSYEQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHT
AVLGLDLIPFSKIFNEFYKLKSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK
EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34410; Mature: 34410

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEE
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHH
IEACKYSFYVSVRYMLKQLLQGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSY
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCC
EQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHTAVLGLDLIPFSKIFNEFYKL
CHHHEEEEEEEECCCEEEEEEECCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHHHHH
KSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRY
HHHHHHHCCCHHHEEEEHHEEECCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC
R
C
>Mature Secondary Structure
MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEE
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHH
IEACKYSFYVSVRYMLKQLLQGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSY
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCC
EQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHTAVLGLDLIPFSKIFNEFYKL
CHHHEEEEEEEECCCEEEEEEECCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHHHHH
KSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRY
HHHHHHHCCCHHHEEEEHHEEECCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA