| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676316
Identifier: 117676316
GI number: 117676316
Start: 266060
End: 266965
Strand: Direct
Name: 117676316
Synonym: Shewana3_4379
Alternate gene names: NA
Gene position: 266060-266965 (Clockwise)
Preceding gene: 117676315
Following gene: 117676326
Centisome position: 95.38
GC content: 46.47
Gene sequence:
>906_bases ATGAACCTAATCCCCTTCGGCCTTCGTAGTGATGGCTTGTATATAGATGCAGAGGACGCAACGCGGGGTAAGTCCTGTGA TTGTACTTGCCCATCATGCGGTATTGCCTTAATCGCACGGCAGGGTGACGTTAATGCGTTCCACTTTGCCCATGACTCCA AAGGTGCGAGTAAGGAAGAGATTGAGGCCTGCAAATACTCGTTTTATGTCTCAGTTCGCTACATGCTGAAGCAGCTTCTA CAGGGGACAGGCTTGTTATTGTTGCCACCTCTCGAGATTGACCATCACGGCCAAACGCACGTCATTACCAAAAGTTTGCC AATCACGGTGGAGCCCAAGGACATAACGCCTGATAGTTATGAGCAGGATATTATGTTTGACTTAATCTTTACGGTCTCAG GCCGCAAGCTATGCCTATACATTAGCCATCCTGGTCGCCCCGCGCCGATATATAACAATCTATCAAGAGATCAGCACACG GCGGTACTAGGGCTTGATTTAATTCCTTTCTCAAAGATATTTAATGAGTTTTACAAACTAAAATCAGCTCAAACACTACT GCGCGAATGGCTTGAAACGTCCATTAAGGGCAAGCATTGGATTTACAATCCAAGGCGCAATGCGTGGTTTGAGCATCAAC AGGCTAAGGCTCCAGCTGTTCAGGAGCAGCAACAGCAACAAGTTCTGGTACAAACCAAGACTACCCGTGATCGGATTAAA GAGCAGATTGCCAAAATGGACAGGTTGAACGTAGTCGCTATATATCGCTGCGTTTTTTGTCAGTTGGACTTTGAAGGCAG TGCGTTACTCAACTACTGCCCCAAGTGTAATGACCATCTAAGTGTGAAAAGAAAATCGGAGATTGCGGCTCAAACTCCAC CTAAAGGCAAGTATCGGTATCGATGA
Upstream 100 bases:
>100_bases ATAAAACTCTTCGACAAGTTCAGGATGAAATGGGTGCATCCCGCGTTAATATCGGACCGATCCTTCAAGAAGGCTTAAAA CTTTGTAAGTAGCTTACCTT
Downstream 100 bases:
>100_bases CTCTATGATTTATTCAAGTAACGTCAACTTATAGCCAAGCGGTGTAAACCAATGCCTACGGCCCGTGTCTAAATTGCGAA CAAAATACCAATCTTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEEIEACKYSFYVSVRYMLKQLL QGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSYEQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHT AVLGLDLIPFSKIFNEFYKLKSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRYR
Sequences:
>Translated_301_residues MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEEIEACKYSFYVSVRYMLKQLL QGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSYEQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHT AVLGLDLIPFSKIFNEFYKLKSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRYR >Mature_301_residues MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEEIEACKYSFYVSVRYMLKQLL QGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSYEQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHT AVLGLDLIPFSKIFNEFYKLKSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34410; Mature: 34410
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEE CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHH IEACKYSFYVSVRYMLKQLLQGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSY HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCC EQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHTAVLGLDLIPFSKIFNEFYKL CHHHEEEEEEEECCCEEEEEEECCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHHHHH KSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRY HHHHHHHCCCHHHEEEEHHEEECCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC R C >Mature Secondary Structure MNLIPFGLRSDGLYIDAEDATRGKSCDCTCPSCGIALIARQGDVNAFHFAHDSKGASKEE CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHH IEACKYSFYVSVRYMLKQLLQGTGLLLLPPLEIDHHGQTHVITKSLPITVEPKDITPDSY HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCC EQDIMFDLIFTVSGRKLCLYISHPGRPAPIYNNLSRDQHTAVLGLDLIPFSKIFNEFYKL CHHHEEEEEEEECCCEEEEEEECCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHHHHH KSAQTLLREWLETSIKGKHWIYNPRRNAWFEHQQAKAPAVQEQQQQQVLVQTKTTRDRIK HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH EQIAKMDRLNVVAIYRCVFCQLDFEGSALLNYCPKCNDHLSVKRKSEIAAQTPPKGKYRY HHHHHHHCCCHHHEEEEHHEEECCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA