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The map label for this gene is srpC [H]

Identifier: 117676302

GI number: 117676302

Start: 253250

End: 254617

Strand: Reverse

Name: srpC [H]

Synonym: Shewana3_4365

Alternate gene names: 117676302

Gene position: 254617-253250 (Counterclockwise)

Preceding gene: 117676303

Following gene: 117676301

Centisome position: 91.28

GC content: 52.27

Gene sequence:

>1368_bases
ATGAGTAACACCACCGAATTAATAGCTCACCAGCCGGTTGAAGCGCCTGCGCCGGTCAGTTTTTGGGAAGCCTTCCGTTT
CTGGTTAAAGCTCGGGTTTGTCAGCTTTGGTGGCCCGGCAGGCCAAATAGCCATCATGCACCAGGAGCTGGTGGAGCGCC
GGCGCTGGATCAGCGAAAAACGGTTTTTGCATGCGCTCAATTACTGCATGGTGTTGCCTGGTCCGGAGGCGCAACAACTT
GCCACTTACATTGGCTGGTTAATGCATCGTACCTGGGGCGGTATAGTGGCGGGTGTGCTGTTTTTGTTGCCATCACTCTT
CATTTTGATTGGACTCTCGTGGGTATATATCGCTTACGGCGACGTAAGTTGGGTAGCCGGTTTGTTCTACGGTATCAAAC
CGGCGGTGACTGCCATCGTCGTGCATGCCGCCCATCGCATTGGTTCACGCGCGTTGAAAAATAATGTGATGTGGGCGATT
GCTGCCGCCGCGTTTGTGGCCATTTTTGCACTCAATATCCCATTCCCTTACATCGTGATTGCAGCGGCACTGATTGGTTA
TTTGGGTGGGCGGTTTCTACCTGACTACTTCAACAGCGGCGGTGGCCATGGCAAGGCTGATAAATCCTTCGGCACCGCGT
TATTCGATGATCACACACCCACGCCCGCGCACGCCATGTTCCGCTGGTCGCGTTTCAGCATGATCTTGATCTCCGGTGCA
TTACTCTGGGCTGTTCCGCTGTTTGCACTTTGGAGTTATTTCGGTTGGGATCACACACTGACACAAATGGCCTGGTTCTT
TACCAAAGCGGCACTACTCACTTTCGGTGGTGCCTATGCGGTATTGCCCTATGTTTATCAGGGTGCGGTCGGCCACTATG
GTTGGCTCACGCCCACGCAAATGATCGATGGCCTCGCGCTCGGTGAAACCACACCAGGGCCGCTGATTATGGTGGTGGCC
TTTGTCGGTTTTATTGGGGGATATGTACAAGCCGTATTTGGCACCGACATGGTATTTCTCGCGGGCGCAGTAGCCGCCAC
CATTGTCACCTGGTTTACCTTCTTGCCCTCGTTTATTTTTATTTTTGCGGGTGCCCCCTTTATTGAAACGACGCACAATG
ATTTGAAATTCACTGCGCCACTCACGGCCATCACGGCGGCGGTGGTAGGTGTGATCTTGAATCTCGCCCTGTTTTTCTGT
TACCACATTTTGTGGCCAGAAGGCTTTGATGGGCGGTTTGAATGGATATCAGCGGTAATTGCTGTTGCAGCGGGTATCGC
ATTATTTCGTTACAAAATGAATGTGATGAAGGTGATTGGCATGTCGGCGCTTGTTGGGCTTGCGGTGTCGTTAATGGGGA
TTAATTAA

Upstream 100 bases:

>100_bases
GGATTGCGCAACAGTATTCATGACGACGATCAACTCATCGCCACGGCTAATGGTGTCTTCGATGCCTTACTGGCTGCTTT
TACAAATAAGGAAACACACC

Downstream 100 bases:

>100_bases
GTCATCTTTCGATCTGCTCGAACTCATTGCTTACACTTAACGGAGGAAAACCAATGAATGATTTTAACCAAAACAAACGT
GATTTCCTGGCTACCAGTGC

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MSNTTELIAHQPVEAPAPVSFWEAFRFWLKLGFVSFGGPAGQIAIMHQELVERRRWISEKRFLHALNYCMVLPGPEAQQL
ATYIGWLMHRTWGGIVAGVLFLLPSLFILIGLSWVYIAYGDVSWVAGLFYGIKPAVTAIVVHAAHRIGSRALKNNVMWAI
AAAAFVAIFALNIPFPYIVIAAALIGYLGGRFLPDYFNSGGGHGKADKSFGTALFDDHTPTPAHAMFRWSRFSMILISGA
LLWAVPLFALWSYFGWDHTLTQMAWFFTKAALLTFGGAYAVLPYVYQGAVGHYGWLTPTQMIDGLALGETTPGPLIMVVA
FVGFIGGYVQAVFGTDMVFLAGAVAATIVTWFTFLPSFIFIFAGAPFIETTHNDLKFTAPLTAITAAVVGVILNLALFFC
YHILWPEGFDGRFEWISAVIAVAAGIALFRYKMNVMKVIGMSALVGLAVSLMGIN

Sequences:

>Translated_455_residues
MSNTTELIAHQPVEAPAPVSFWEAFRFWLKLGFVSFGGPAGQIAIMHQELVERRRWISEKRFLHALNYCMVLPGPEAQQL
ATYIGWLMHRTWGGIVAGVLFLLPSLFILIGLSWVYIAYGDVSWVAGLFYGIKPAVTAIVVHAAHRIGSRALKNNVMWAI
AAAAFVAIFALNIPFPYIVIAAALIGYLGGRFLPDYFNSGGGHGKADKSFGTALFDDHTPTPAHAMFRWSRFSMILISGA
LLWAVPLFALWSYFGWDHTLTQMAWFFTKAALLTFGGAYAVLPYVYQGAVGHYGWLTPTQMIDGLALGETTPGPLIMVVA
FVGFIGGYVQAVFGTDMVFLAGAVAATIVTWFTFLPSFIFIFAGAPFIETTHNDLKFTAPLTAITAAVVGVILNLALFFC
YHILWPEGFDGRFEWISAVIAVAAGIALFRYKMNVMKVIGMSALVGLAVSLMGIN
>Mature_454_residues
SNTTELIAHQPVEAPAPVSFWEAFRFWLKLGFVSFGGPAGQIAIMHQELVERRRWISEKRFLHALNYCMVLPGPEAQQLA
TYIGWLMHRTWGGIVAGVLFLLPSLFILIGLSWVYIAYGDVSWVAGLFYGIKPAVTAIVVHAAHRIGSRALKNNVMWAIA
AAAFVAIFALNIPFPYIVIAAALIGYLGGRFLPDYFNSGGGHGKADKSFGTALFDDHTPTPAHAMFRWSRFSMILISGAL
LWAVPLFALWSYFGWDHTLTQMAWFFTKAALLTFGGAYAVLPYVYQGAVGHYGWLTPTQMIDGLALGETTPGPLIMVVAF
VGFIGGYVQAVFGTDMVFLAGAVAATIVTWFTFLPSFIFIFAGAPFIETTHNDLKFTAPLTAITAAVVGVILNLALFFCY
HILWPEGFDGRFEWISAVIAVAAGIALFRYKMNVMKVIGMSALVGLAVSLMGIN

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 49751; Mature: 49620

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNTTELIAHQPVEAPAPVSFWEAFRFWLKLGFVSFGGPAGQIAIMHQELVERRRWISEK
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]