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The map label for this gene is 117676295

Identifier: 117676295

GI number: 117676295

Start: 243930

End: 244595

Strand: Reverse

Name: 117676295

Synonym: Shewana3_4358

Alternate gene names: NA

Gene position: 244595-243930 (Counterclockwise)

Preceding gene: 117676296

Following gene: 117676292

Centisome position: 87.69

GC content: 47.15

Gene sequence:

>666_bases
ATGAGCCGCGCTGACGCACTAACACCTGCCCAAATCAATCGAGTCCTGAAAACCTGCCAACTCATGCAGCATAGCGAAGG
TAAACGCTGTGCTGTTGTACTTTCTCACGCCGCTATGCGCGTGACTGAGATTGCACTACTCAAAACTGAACACATCCTTT
TTGCCAATGGCAAAATCAAAGAAGAAATCCACCTACCAGCCAGCATTTGTAAGATGTTGAAACCAAGAACCGTTTGGCTT
ACAAACAAAACATCGATGGAGATTATTCAGCAATGGATTGATCACCGCTTAGTTAAAAAGTGGGGCGTATCTGGCCGCGC
TGACTTCCAAGGATTAATACCCGAGTCACGGTTTCTGTATACAGTTCGTGGTGCTCCTTACTCGATACAGCCGAAACCAA
GGAAGCTCGAATCAGGAGAGGTACGAGAGTATTGGGCTTGTGACTCGCTAGAGCAGGCTATGAGGGAGATCTACAGGAAA
TGCGGATTACCCTTGGCATCCTCACATTCAGGCCGTAAATCGCTTTCTACGAATGCAGTAGTCAATGGCGTCCCGATTGA
AACAGTAGCGCGAATACTAGGCCACGCCAGCCCTGAAACTACTATCGACTATGTTGTTATTCAACCAAAGCGAATCGAAG
AAATGTGCGGTCTTGATTGGGTTTAA

Upstream 100 bases:

>100_bases
TGCTTTCCGTGAAAGGCTTACGGAATACCGTGTTAAACTGATTAGGCAGTGAAAAAATCCTATTGTCTGCATATCCCCAA
ATAAAGAGGAAATACAGACA

Downstream 100 bases:

>100_bases
CTTGTTGCCATTTATGAGCGAATAGCGCACACTGTAAAGTTGTTAGTTTCGTAAAATTTTGAGGAATTTATGGCGGAATC
CGCAGATAAAGAGGCTTTTT

Product: phage integrase family protein

Products: NA

Alternate protein names: Site-Specific Recombinase; Phage Integrase; Phage Integrase Family Protein

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSRADALTPAQINRVLKTCQLMQHSEGKRCAVVLSHAAMRVTEIALLKTEHILFANGKIKEEIHLPASICKMLKPRTVWL
TNKTSMEIIQQWIDHRLVKKWGVSGRADFQGLIPESRFLYTVRGAPYSIQPKPRKLESGEVREYWACDSLEQAMREIYRK
CGLPLASSHSGRKSLSTNAVVNGVPIETVARILGHASPETTIDYVVIQPKRIEEMCGLDWV

Sequences:

>Translated_221_residues
MSRADALTPAQINRVLKTCQLMQHSEGKRCAVVLSHAAMRVTEIALLKTEHILFANGKIKEEIHLPASICKMLKPRTVWL
TNKTSMEIIQQWIDHRLVKKWGVSGRADFQGLIPESRFLYTVRGAPYSIQPKPRKLESGEVREYWACDSLEQAMREIYRK
CGLPLASSHSGRKSLSTNAVVNGVPIETVARILGHASPETTIDYVVIQPKRIEEMCGLDWV
>Mature_220_residues
SRADALTPAQINRVLKTCQLMQHSEGKRCAVVLSHAAMRVTEIALLKTEHILFANGKIKEEIHLPASICKMLKPRTVWLT
NKTSMEIIQQWIDHRLVKKWGVSGRADFQGLIPESRFLYTVRGAPYSIQPKPRKLESGEVREYWACDSLEQAMREIYRKC
GLPLASSHSGRKSLSTNAVVNGVPIETVARILGHASPETTIDYVVIQPKRIEEMCGLDWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24946; Mature: 24815

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRADALTPAQINRVLKTCQLMQHSEGKRCAVVLSHAAMRVTEIALLKTEHILFANGKIK
CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
EEIHLPASICKMLKPRTVWLTNKTSMEIIQQWIDHRLVKKWGVSGRADFQGLIPESRFLY
HHCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
TVRGAPYSIQPKPRKLESGEVREYWACDSLEQAMREIYRKCGLPLASSHSGRKSLSTNAV
EECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VNGVPIETVARILGHASPETTIDYVVIQPKRIEEMCGLDWV
ECCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCC
>Mature Secondary Structure 
SRADALTPAQINRVLKTCQLMQHSEGKRCAVVLSHAAMRVTEIALLKTEHILFANGKIK
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
EEIHLPASICKMLKPRTVWLTNKTSMEIIQQWIDHRLVKKWGVSGRADFQGLIPESRFLY
HHCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
TVRGAPYSIQPKPRKLESGEVREYWACDSLEQAMREIYRKCGLPLASSHSGRKSLSTNAV
EECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VNGVPIETVARILGHASPETTIDYVVIQPKRIEEMCGLDWV
ECCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA