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The map label for this gene is tnpM [H]

Identifier: 117676285

GI number: 117676285

Start: 232761

End: 232973

Strand: Direct

Name: tnpM [H]

Synonym: Shewana3_4348

Alternate gene names: 117676285

Gene position: 232761-232973 (Clockwise)

Preceding gene: 117676284

Following gene: 117676286

Centisome position: 83.44

GC content: 59.15

Gene sequence:

>213_bases
ATGAACGCAAACGCCCCGAACACTGCCAGTTGCACCACCTGCTGCGTATGCTGCAAAGAAATTCCGCTCGATGCCGCCTT
CACCCCGGAAGGCGCGGAATACGTCGAACATTTCTGCGGGCTGGATTGCTATGAACGCTTCCAGGCACGCGCCAAGGCCG
CGACAGAATCTGACATTGCGCCTGTCCCTGGCGGTTCGCAGCCGTCAGATTGA

Upstream 100 bases:

>100_bases
CGCGGCTGCTGCGGGCCTTCAAGGGAAGATCATGACCGCTTCCCAGCCAGCCGAGAGTGGGCAGCTTTGAGCTTCGCTAC
CAATCTGGAGGAGTACCACC

Downstream 100 bases:

>100_bases
GGCATGCCCTAACTGGGCGTCAGGCCGGAACCTTGGGCAGTGTCAGAATAGGGCCGATTCCAGCATTTTCTGACGACTCG
CCTGCAACCTCTAGGGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MNANAPNTASCTTCCVCCKEIPLDAAFTPEGAEYVEHFCGLDCYERFQARAKAATESDIAPVPGGSQPSD

Sequences:

>Translated_70_residues
MNANAPNTASCTTCCVCCKEIPLDAAFTPEGAEYVEHFCGLDCYERFQARAKAATESDIAPVPGGSQPSD
>Mature_70_residues
MNANAPNTASCTTCCVCCKEIPLDAAFTPEGAEYVEHFCGLDCYERFQARAKAATESDIAPVPGGSQPSD

Specific function: This protein enhances the Tn21 transposition by activating expression of the transposase gene and decreases the resolution of the cointegrated DNA by suppressing expression of the resolvase gene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR021767 [H]

Pfam domain/function: PF11809 DUF3330; PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 7375; Mature: 7375

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
10.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANAPNTASCTTCCVCCKEIPLDAAFTPEGAEYVEHFCGLDCYERFQARAKAATESDIA
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PVPGGSQPSD
CCCCCCCCCC
>Mature Secondary Structure
MNANAPNTASCTTCCVCCKEIPLDAAFTPEGAEYVEHFCGLDCYERFQARAKAATESDIA
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PVPGGSQPSD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2992807 [H]