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The map label for this gene is ykgB [H]

Identifier: 117676264

GI number: 117676264

Start: 216272

End: 216787

Strand: Reverse

Name: ykgB [H]

Synonym: Shewana3_4327

Alternate gene names: 117676264

Gene position: 216787-216272 (Counterclockwise)

Preceding gene: 117676265

Following gene: 117676263

Centisome position: 77.72

GC content: 41.47

Gene sequence:

>516_bases
ATGACTATTCCCGAAATTGAAAATGGTGTCCAGACTACCAATATCCTTAGTAATAATCTCGGTGCAAAAGTCACTAAGTT
TGGTATAGGTGGCATCTACGTTGCCATGACGATAATATATTTGTGGTTTGGTGGTATGAAATTCACTAGCTACGAAGCAA
ACGGTATACATGGTTTTGTTAGTAATAGCCCTCTGCTTTCATGGATGTATAGTTTCCTCAGCATTCAAGGATTCTCAAAT
TTTCTGGGTGTGCTTGAAATTTCAGTTGGCCTGTTAATCGCTGCACGAGTTTTCTCCCCTAAGCTCGCAATCTTGGGCGG
TGTACTTTCAACCGGACTCTTTTTTACGACATTGTCGTTCATGCTGACTACACCCGGTGTTTTTGAGGCATCTCTTGGGT
TTCCTGCGATCTCTGTGGTTCCTGGCCAGTTTTTGCTAAAAGATTTAGGCTTGTTTGTCGTGTCTATATTTATCGTAGGC
ACATCACTTACAGCACTGGAGCACAAAAACAAATAA

Upstream 100 bases:

>100_bases
GTTCGACTCGAGTAAACATATAGTTTTTCTCAAGAGTCATATCATTTTAGTGGGCTACATAGAGTGAGTCCACATGGCTA
AAAATAATTGGAGATATAAG

Downstream 100 bases:

>100_bases
GCCGCATCCGAAACAACTATAAGTTAGAGGGCCTTAAATTCTGCGGTATAGGTCTTGCAGTTCTTTTTAGCTGTCATAGG
CACCTCGTTATGTGATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTIPEIENGVQTTNILSNNLGAKVTKFGIGGIYVAMTIIYLWFGGMKFTSYEANGIHGFVSNSPLLSWMYSFLSIQGFSN
FLGVLEISVGLLIAARVFSPKLAILGGVLSTGLFFTTLSFMLTTPGVFEASLGFPAISVVPGQFLLKDLGLFVVSIFIVG
TSLTALEHKNK

Sequences:

>Translated_171_residues
MTIPEIENGVQTTNILSNNLGAKVTKFGIGGIYVAMTIIYLWFGGMKFTSYEANGIHGFVSNSPLLSWMYSFLSIQGFSN
FLGVLEISVGLLIAARVFSPKLAILGGVLSTGLFFTTLSFMLTTPGVFEASLGFPAISVVPGQFLLKDLGLFVVSIFIVG
TSLTALEHKNK
>Mature_170_residues
TIPEIENGVQTTNILSNNLGAKVTKFGIGGIYVAMTIIYLWFGGMKFTSYEANGIHGFVSNSPLLSWMYSFLSIQGFSNF
LGVLEISVGLLIAARVFSPKLAILGGVLSTGLFFTTLSFMLTTPGVFEASLGFPAISVVPGQFLLKDLGLFVVSIFIVGT
SLTALEHKNK

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081715, Length=173, Percent_Identity=31.7919075144509, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 18328; Mature: 18197

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPEIENGVQTTNILSNNLGAKVTKFGIGGIYVAMTIIYLWFGGMKFTSYEANGIHGFV
CCCCCCCCCCHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEC
SNSPLLSWMYSFLSIQGFSNFLGVLEISVGLLIAARVFSPKLAILGGVLSTGLFFTTLSF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
MLTTPGVFEASLGFPAISVVPGQFLLKDLGLFVVSIFIVGTSLTALEHKNK
HHCCCCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC
>Mature Secondary Structure 
TIPEIENGVQTTNILSNNLGAKVTKFGIGGIYVAMTIIYLWFGGMKFTSYEANGIHGFV
CCCCCCCCCHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEC
SNSPLLSWMYSFLSIQGFSNFLGVLEISVGLLIAARVFSPKLAILGGVLSTGLFFTTLSF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
MLTTPGVFEASLGFPAISVVPGQFLLKDLGLFVVSIFIVGTSLTALEHKNK
HHCCCCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]