| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is msrA2 [H]
Identifier: 117676262
GI number: 117676262
Start: 215086
End: 215586
Strand: Reverse
Name: msrA2 [H]
Synonym: Shewana3_4325
Alternate gene names: 117676262
Gene position: 215586-215086 (Counterclockwise)
Preceding gene: 117676263
Following gene: 117676261
Centisome position: 77.29
GC content: 46.11
Gene sequence:
>501_bases ATGGCAATTGAACGCGCAGTATTAGCCGGTGGCTGCTTTTGGGGCATGCAGGATCTTATCCGCAAACGTCCCGGTATCAC TTCAACCCGAGTAGGTTATACCGGTGGTGAAGTGGCTAATGCTACCTACCGCAATCATGGTAACCATGCTGAAGGCATTG AAATAATGTTCGATAATGAAATCACCAGCTATCGACAAATTTTAGAGTTTTTCTTTCAGATTCATGACCCTAGTACAGTA AATAGACAAGGTAATGACAAGGGCACATCTTATCGCTCAGCCATTTATTATACCTCTGAGGCACAGCATGCTGAGGCAGT AAAAACCATTGCTGACGTGGATGCTTCGGGATTATGGCCTGGAAAAGTAGTGACTGAAGTCGAACCTGCAAGTGATTTTT GGGAAGCGGAGGCTATGCATCAGGACTATTTGGAACTCCGACCAAATGGCTATACCTGCCACTTCCCCAGACCAGACTGG AAGTTGCCCTCATCTCAATGA
Upstream 100 bases:
>100_bases GTTATTGTATTAACTCAGCGTCATTACGTTTTATTCCTAGGGAAGAAATGGCAAGTAAAGGTTACGCAGAGTATTTAGAC CAAGTAGAGGACATTTAATT
Downstream 100 bases:
>100_bases GTTTGCAGCAGCCCACACAGACTTGCAATTTGCATACGACAACCACCCTTAATACAATCGGCTTAGGCGGTGGTTGTCAC TGGTGCACCGAAGGCGTATT
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MAIERAVLAGGCFWGMQDLIRKRPGITSTRVGYTGGEVANATYRNHGNHAEGIEIMFDNEITSYRQILEFFFQIHDPSTV NRQGNDKGTSYRSAIYYTSEAQHAEAVKTIADVDASGLWPGKVVTEVEPASDFWEAEAMHQDYLELRPNGYTCHFPRPDW KLPSSQ
Sequences:
>Translated_166_residues MAIERAVLAGGCFWGMQDLIRKRPGITSTRVGYTGGEVANATYRNHGNHAEGIEIMFDNEITSYRQILEFFFQIHDPSTV NRQGNDKGTSYRSAIYYTSEAQHAEAVKTIADVDASGLWPGKVVTEVEPASDFWEAEAMHQDYLELRPNGYTCHFPRPDW KLPSSQ >Mature_165_residues AIERAVLAGGCFWGMQDLIRKRPGITSTRVGYTGGEVANATYRNHGNHAEGIEIMFDNEITSYRQILEFFFQIHDPSTVN RQGNDKGTSYRSAIYYTSEAQHAEAVKTIADVDASGLWPGKVVTEVEPASDFWEAEAMHQDYLELRPNGYTCHFPRPDWK LPSSQ
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=156, Percent_Identity=37.1794871794872, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI208609995, Length=158, Percent_Identity=36.7088607594937, Blast_Score=104, Evalue=3e-23, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=38.3177570093458, Blast_Score=77, Evalue=6e-15, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=41.8300653594771, Blast_Score=117, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17533973, Length=141, Percent_Identity=34.7517730496454, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320881, Length=165, Percent_Identity=35.7575757575758, Blast_Score=108, Evalue=3e-25, Organism=Drosophila melanogaster, GI24664627, Length=141, Percent_Identity=32.6241134751773, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI45553131, Length=136, Percent_Identity=33.0882352941176, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24664631, Length=141, Percent_Identity=31.2056737588652, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 18706; Mature: 18575
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIERAVLAGGCFWGMQDLIRKRPGITSTRVGYTGGEVANATYRNHGNHAEGIEIMFDNE CCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCC ITSYRQILEFFFQIHDPSTVNRQGNDKGTSYRSAIYYTSEAQHAEAVKTIADVDASGLWP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC GKVVTEVEPASDFWEAEAMHQDYLELRPNGYTCHFPRPDWKLPSSQ CCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure AIERAVLAGGCFWGMQDLIRKRPGITSTRVGYTGGEVANATYRNHGNHAEGIEIMFDNE CCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCC ITSYRQILEFFFQIHDPSTVNRQGNDKGTSYRSAIYYTSEAQHAEAVKTIADVDASGLWP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC GKVVTEVEPASDFWEAEAMHQDYLELRPNGYTCHFPRPDWKLPSSQ CCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]