| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676195
Identifier: 117676195
GI number: 117676195
Start: 133865
End: 134134
Strand: Reverse
Name: 117676195
Synonym: Shewana3_4256
Alternate gene names: NA
Gene position: 134134-133865 (Counterclockwise)
Preceding gene: 117676196
Following gene: 117676194
Centisome position: 48.09
GC content: 47.78
Gene sequence:
>270_bases TTGTTTATGGCTGACATGGAAATCGCTCAAGCGTTGTTGGCAGCTAGTGAACAAAACCAGCTAGCCCAGATTATTGAGAC TCACAATCTGGGTGAGCTCCCACACTCACTGCGATTAGCCATCAACATATTTGAGATTAACGCAGATAATATCCAGCAAC ACCCCGAGGCAGCGCAGTCCCTTCTGCGTTGCCCAATTCCAACGACATTTGGTGAGACTGAATCAATCAGGCGCACCATA TTGTCACTGCTCACCCAAAAGCACAGTTAG
Upstream 100 bases:
>100_bases AGAGGTGTTGCTCCGCATTAAGCAAATTCGTAGCGAATACCAAGACGAAGGCAAAGTACCGCCATCGCCACAGCAGCTGC TTCAGATGGCAGGGAATTAA
Downstream 100 bases:
>100_bases GCAGGATGTATGGCCAGTAAGAAAGCAGCCAAAAAAATCACCGGCGATGACGAAAATGTTATGGGCTTACGCCAACAGCG TCCCATCCGTGTTCATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MFMADMEIAQALLAASEQNQLAQIIETHNLGELPHSLRLAINIFEINADNIQQHPEAAQSLLRCPIPTTFGETESIRRTI LSLLTQKHS
Sequences:
>Translated_89_residues MFMADMEIAQALLAASEQNQLAQIIETHNLGELPHSLRLAINIFEINADNIQQHPEAAQSLLRCPIPTTFGETESIRRTI LSLLTQKHS >Mature_89_residues MFMADMEIAQALLAASEQNQLAQIIETHNLGELPHSLRLAINIFEINADNIQQHPEAAQSLLRCPIPTTFGETESIRRTI LSLLTQKHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9949; Mature: 9949
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMADMEIAQALLAASEQNQLAQIIETHNLGELPHSLRLAINIFEINADNIQQHPEAAQS CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHEEHEEECCCHHHHCCHHHHHH LLRCPIPTTFGETESIRRTILSLLTQKHS HHHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFMADMEIAQALLAASEQNQLAQIIETHNLGELPHSLRLAINIFEINADNIQQHPEAAQS CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHEEHEEECCCHHHHCCHHHHHH LLRCPIPTTFGETESIRRTILSLLTQKHS HHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA