| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676190
Identifier: 117676190
GI number: 117676190
Start: 127066
End: 127518
Strand: Reverse
Name: 117676190
Synonym: Shewana3_4251
Alternate gene names: NA
Gene position: 127518-127066 (Counterclockwise)
Preceding gene: 117676191
Following gene: 117676189
Centisome position: 45.71
GC content: 40.62
Gene sequence:
>453_bases ATGGCTAAAGTGCGTAACCCCGAAGTAACTCAGAAAAAACTTTTAGATGCTTTACAACGCCTTGTTGATGGGCAACCAGA GCGATTGACTTCTAAGTACAAAGTTAACGTCAAATCTGTTCAAGAAGAAGCAGGATTAAGCCTAGGAGCAGCTTACCGCT ACCCTGATGTCATGGATGCTATTGAAGCGGCCAAGCTTGAACAAAGCAAACGTTCGGGCAACTTGAGAAAGCGGAACGTA AATTCTGAGCTAGACAGGCTTCGAAAGGAAAAGGCAAAAGAAGTTGCTTTGAAAGAAAAATATAGGGCCGAACTAACTGA AGCCAATAGCCGATTAGATCAGCTCTACTCTGAGCAAACTATGCAGTTGATGGCCATGTTTAACTTGCTAGACATCAATG ATAAAAACAAATTATTACAAGAGGTTAAGCCTAATATTGTGAGGATTAAATAA
Upstream 100 bases:
>100_bases ATACGTGCAGCGGAGAAAATCATGGCTGATATGAATCAAAACTTTGAACCGTATCAGTCACCAGCAGAAGAATGGCTGAT TTCGTCAACGGTGCAATGAT
Downstream 100 bases:
>100_bases GGTGCAAACCTAGAATTTGACGTAATCACTCACGACCCGTAACGTATTGAAATAATAAATATAGTTATGTTTACTGGTTA ATATATAATCTTCATAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MAKVRNPEVTQKKLLDALQRLVDGQPERLTSKYKVNVKSVQEEAGLSLGAAYRYPDVMDAIEAAKLEQSKRSGNLRKRNV NSELDRLRKEKAKEVALKEKYRAELTEANSRLDQLYSEQTMQLMAMFNLLDINDKNKLLQEVKPNIVRIK
Sequences:
>Translated_150_residues MAKVRNPEVTQKKLLDALQRLVDGQPERLTSKYKVNVKSVQEEAGLSLGAAYRYPDVMDAIEAAKLEQSKRSGNLRKRNV NSELDRLRKEKAKEVALKEKYRAELTEANSRLDQLYSEQTMQLMAMFNLLDINDKNKLLQEVKPNIVRIK >Mature_149_residues AKVRNPEVTQKKLLDALQRLVDGQPERLTSKYKVNVKSVQEEAGLSLGAAYRYPDVMDAIEAAKLEQSKRSGNLRKRNVN SELDRLRKEKAKEVALKEKYRAELTEANSRLDQLYSEQTMQLMAMFNLLDINDKNKLLQEVKPNIVRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17289; Mature: 17158
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVRNPEVTQKKLLDALQRLVDGQPERLTSKYKVNVKSVQEEAGLSLGAAYRYPDVMDA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHH IEAAKLEQSKRSGNLRKRNVNSELDRLRKEKAKEVALKEKYRAELTEANSRLDQLYSEQT HHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLMAMFNLLDINDKNKLLQEVKPNIVRIK HHHHHHHHHHCCCCHHHHHHHHCCCCEECC >Mature Secondary Structure AKVRNPEVTQKKLLDALQRLVDGQPERLTSKYKVNVKSVQEEAGLSLGAAYRYPDVMDA CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHH IEAAKLEQSKRSGNLRKRNVNSELDRLRKEKAKEVALKEKYRAELTEANSRLDQLYSEQT HHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLMAMFNLLDINDKNKLLQEVKPNIVRIK HHHHHHHHHHCCCCHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA