Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

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The map label for this gene is 117676168

Identifier: 117676168

GI number: 117676168

Start: 102690

End: 103265

Strand: Direct

Name: 117676168

Synonym: Shewana3_4228

Alternate gene names: NA

Gene position: 102690-103265 (Clockwise)

Preceding gene: 117676164

Following gene: 117676169

Centisome position: 36.81

GC content: 45.31

Gene sequence:

>576_bases
ATGAAAGTATCCAGTTCTAGCCAGTTAACCGATTTACTGTCTTCCGTTTGGCCCAATAACGAAGTTAACGCCTTACAAGG
TCTGCTTTCATTGTTTGACACGTTAATTAATCACGGCGCCAGAGTATGCGAGCAGCCAACGCCGGATATTACTCCCGCTC
AAAAGACGTTGTTTGTTCAGGCTGTCTATTCAGAGTTATCGAGCGGTAATCTCGACCCCATTGGAAAAGCAATTAGTTTT
TATGGTGCCGATGCAGGGTTTACTCACGACAATCAGGATTTCCGCTTGTGTATCCATGCCGGTGATCGTCAGCCATTAAC
TGTGAAATCGTATTCATCATTGCAGTCCGGTTCGGGGCTGGATGTACAGGGTTATCTGTTACAGCTGGCTAACGGTTGTC
AAAGCAACATCGTAAACGACCCATTTCATTCTCTCTGGATACGACTAGAAGATCCGAGTCGTAGCAAGCTAATTGCCGCA
TACGTGCAGATTACTCTGCTAATGAAAGCGATTTCTAAGCGAGTAGGTAGGGCGGTATCACCGTTTTGTGTGGAACTGGT
GGCAATAAATATTTAA

Upstream 100 bases:

>100_bases
GGAATTTTGAAGTAAATCGTGGCAGGGAGGGGAGCGCAAATTTGCGTGAATTGATTCAGAGGCCAATATCGGGCCATCTT
TCCCCGATTGCGAGGCATTC

Downstream 100 bases:

>100_bases
ATATACAAAATTTGTGTGATTATGAGTTTGTGTTTTAATGTGCTCGTTAATTACTTCTTTGGAGAGAGCAAAATGGGTTC
AGTTAATAAAGTTATCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQAVYSELSSGNLDPIGKAISF
YGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGLDVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAA
YVQITLLMKAISKRVGRAVSPFCVELVAINI

Sequences:

>Translated_191_residues
MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQAVYSELSSGNLDPIGKAISF
YGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGLDVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAA
YVQITLLMKAISKRVGRAVSPFCVELVAINI
>Mature_191_residues
MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQAVYSELSSGNLDPIGKAISF
YGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGLDVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAA
YVQITLLMKAISKRVGRAVSPFCVELVAINI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20781; Mature: 20781

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQ
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHH
AVYSELSSGNLDPIGKAISFYGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGL
HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCC
DVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAAYVQITLLMKAISKRVGRAVS
CHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PFCVELVAINI
HHHHHHHHCCC
>Mature Secondary Structure
MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQ
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHH
AVYSELSSGNLDPIGKAISFYGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGL
HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCC
DVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAAYVQITLLMKAISKRVGRAVS
CHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PFCVELVAINI
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA