| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676168
Identifier: 117676168
GI number: 117676168
Start: 102690
End: 103265
Strand: Direct
Name: 117676168
Synonym: Shewana3_4228
Alternate gene names: NA
Gene position: 102690-103265 (Clockwise)
Preceding gene: 117676164
Following gene: 117676169
Centisome position: 36.81
GC content: 45.31
Gene sequence:
>576_bases ATGAAAGTATCCAGTTCTAGCCAGTTAACCGATTTACTGTCTTCCGTTTGGCCCAATAACGAAGTTAACGCCTTACAAGG TCTGCTTTCATTGTTTGACACGTTAATTAATCACGGCGCCAGAGTATGCGAGCAGCCAACGCCGGATATTACTCCCGCTC AAAAGACGTTGTTTGTTCAGGCTGTCTATTCAGAGTTATCGAGCGGTAATCTCGACCCCATTGGAAAAGCAATTAGTTTT TATGGTGCCGATGCAGGGTTTACTCACGACAATCAGGATTTCCGCTTGTGTATCCATGCCGGTGATCGTCAGCCATTAAC TGTGAAATCGTATTCATCATTGCAGTCCGGTTCGGGGCTGGATGTACAGGGTTATCTGTTACAGCTGGCTAACGGTTGTC AAAGCAACATCGTAAACGACCCATTTCATTCTCTCTGGATACGACTAGAAGATCCGAGTCGTAGCAAGCTAATTGCCGCA TACGTGCAGATTACTCTGCTAATGAAAGCGATTTCTAAGCGAGTAGGTAGGGCGGTATCACCGTTTTGTGTGGAACTGGT GGCAATAAATATTTAA
Upstream 100 bases:
>100_bases GGAATTTTGAAGTAAATCGTGGCAGGGAGGGGAGCGCAAATTTGCGTGAATTGATTCAGAGGCCAATATCGGGCCATCTT TCCCCGATTGCGAGGCATTC
Downstream 100 bases:
>100_bases ATATACAAAATTTGTGTGATTATGAGTTTGTGTTTTAATGTGCTCGTTAATTACTTCTTTGGAGAGAGCAAAATGGGTTC AGTTAATAAAGTTATCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQAVYSELSSGNLDPIGKAISF YGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGLDVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAA YVQITLLMKAISKRVGRAVSPFCVELVAINI
Sequences:
>Translated_191_residues MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQAVYSELSSGNLDPIGKAISF YGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGLDVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAA YVQITLLMKAISKRVGRAVSPFCVELVAINI >Mature_191_residues MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQAVYSELSSGNLDPIGKAISF YGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGLDVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAA YVQITLLMKAISKRVGRAVSPFCVELVAINI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20781; Mature: 20781
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQ CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHH AVYSELSSGNLDPIGKAISFYGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGL HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCC DVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAAYVQITLLMKAISKRVGRAVS CHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PFCVELVAINI HHHHHHHHCCC >Mature Secondary Structure MKVSSSSQLTDLLSSVWPNNEVNALQGLLSLFDTLINHGARVCEQPTPDITPAQKTLFVQ CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHH AVYSELSSGNLDPIGKAISFYGADAGFTHDNQDFRLCIHAGDRQPLTVKSYSSLQSGSGL HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCC DVQGYLLQLANGCQSNIVNDPFHSLWIRLEDPSRSKLIAAYVQITLLMKAISKRVGRAVS CHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PFCVELVAINI HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA