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The map label for this gene is 117676167

Identifier: 117676167

GI number: 117676167

Start: 100875

End: 102038

Strand: Reverse

Name: 117676167

Synonym: Shewana3_4227

Alternate gene names: NA

Gene position: 102038-100875 (Counterclockwise)

Preceding gene: 117676174

Following gene: 117676166

Centisome position: 36.58

GC content: 41.32

Gene sequence:

>1164_bases
ATGACAGATAAAGCAAACAACAAACAGGTACTACAGGGTTCAGATGGGGTAACTACAACATCGAAGAAAGTCAAAACTGA
CAAATTCGATGTACATCCAGAAGCGCAATTACCGCAGACGTATAAGAAAAACCACAACTTAATCTACAGTCGTATATCGA
TGACGACCCATGAGCAAAATCTACTTGCCCTATTTCTGATCCAGATGCAAAAGACAGAGTGGAAAGAAGAAACCCAGCTC
GAAATTTCTATCCCCGCCTCTAGGTTGGCTGATTGGCTTGAAGTTGAATCCAAAAGCCTTGCGGCAACAATTAAACCTGT
CGCTCTTAGGCTTCAGAAACGAACGGTTTTAGCAGAGCATCCGACGACTCATGAATTTGAATCATCCGTCCTTTTCCCGA
CAGTGAAATATGCACGTGGAAAGTTAACAATGGTACCAAATTATGACTTGAGAGACTTTTTTCACGACGCGTCAAAAGGA
TACGCTTCCGTTAACGTGGCTAGATTCCTACGACTGAGGGGAAAATACTCTAAACCAATGTATGACCTATTATCGAGGTT
CAAAACCCCTGAGAAGCAGTTGTATAAGACAGACGTTATGACTCTCAAAGGTATTTTCGGGTTAGTTGACGACAAAGATA
ACTATCTGCCAGGCAAGAAAACCATGAAGGACACATCGGTATTCGTCAATCAGGCGCTGGTAAAGTCGATTGAAGAAATA
GAGGAGGCTTGTAGTGACGAGGTAATGTTTTTCAACACAGATCCTTCTGGTAAAAAACGTCATGGCATCATTGAAAACAA
AACAGGCAACAAAATTACCAGCATTGAGTTCGAGTACCTTTGGATAGATCAATTCATCAAATTGCATCCAATGGATCTTG
AAGCAGCAGCGGAAGTCGCAATGAATGCAGAGAATCGTCTGCGTATGAAAAAAGAAACGCTTACTCAAGAAGAGACTGAG
CAGCTGGCCGTAGCTTACTACGTTCTCTCATCACACTATGAGAAATACAGACCGCGCTGTAGAGAATTATTTTACGACAT
TTACAAACACTACCGAAAAATATCGATTGAGAAAGCAGAAAACGAATCTGAACAAACTGAACGACCAAAACTGAAGAGTT
CTGCACTCGATAAGTTAGATTTCTTGTTAAACGTCAATACCTGA

Upstream 100 bases:

>100_bases
TTTAATAGTTGGGTCAACACGAAAAAAATATGGAGGGAATACGAAAAAAATATGGAATGAGAAAATGGCGAACGCTATAT
TGATGCATAGGGAGGATGCC

Downstream 100 bases:

>100_bases
TCCCCCTCCCCTCCATATCAAACCTTTGGTCTTTCTCAATAGTTTACTCAAATACGAGTAAACTATTGGGTTAGTGCACG
AAAAAAATATTGAGTTGGTC

Product: initiator RepB protein

Products: NA

Alternate protein names: Initiator RepB Protein; Replication Initiation Protein RepB

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTDKANNKQVLQGSDGVTTTSKKVKTDKFDVHPEAQLPQTYKKNHNLIYSRISMTTHEQNLLALFLIQMQKTEWKEETQL
EISIPASRLADWLEVESKSLAATIKPVALRLQKRTVLAEHPTTHEFESSVLFPTVKYARGKLTMVPNYDLRDFFHDASKG
YASVNVARFLRLRGKYSKPMYDLLSRFKTPEKQLYKTDVMTLKGIFGLVDDKDNYLPGKKTMKDTSVFVNQALVKSIEEI
EEACSDEVMFFNTDPSGKKRHGIIENKTGNKITSIEFEYLWIDQFIKLHPMDLEAAAEVAMNAENRLRMKKETLTQEETE
QLAVAYYVLSSHYEKYRPRCRELFYDIYKHYRKISIEKAENESEQTERPKLKSSALDKLDFLLNVNT

Sequences:

>Translated_387_residues
MTDKANNKQVLQGSDGVTTTSKKVKTDKFDVHPEAQLPQTYKKNHNLIYSRISMTTHEQNLLALFLIQMQKTEWKEETQL
EISIPASRLADWLEVESKSLAATIKPVALRLQKRTVLAEHPTTHEFESSVLFPTVKYARGKLTMVPNYDLRDFFHDASKG
YASVNVARFLRLRGKYSKPMYDLLSRFKTPEKQLYKTDVMTLKGIFGLVDDKDNYLPGKKTMKDTSVFVNQALVKSIEEI
EEACSDEVMFFNTDPSGKKRHGIIENKTGNKITSIEFEYLWIDQFIKLHPMDLEAAAEVAMNAENRLRMKKETLTQEETE
QLAVAYYVLSSHYEKYRPRCRELFYDIYKHYRKISIEKAENESEQTERPKLKSSALDKLDFLLNVNT
>Mature_386_residues
TDKANNKQVLQGSDGVTTTSKKVKTDKFDVHPEAQLPQTYKKNHNLIYSRISMTTHEQNLLALFLIQMQKTEWKEETQLE
ISIPASRLADWLEVESKSLAATIKPVALRLQKRTVLAEHPTTHEFESSVLFPTVKYARGKLTMVPNYDLRDFFHDASKGY
ASVNVARFLRLRGKYSKPMYDLLSRFKTPEKQLYKTDVMTLKGIFGLVDDKDNYLPGKKTMKDTSVFVNQALVKSIEEIE
EACSDEVMFFNTDPSGKKRHGIIENKTGNKITSIEFEYLWIDQFIKLHPMDLEAAAEVAMNAENRLRMKKETLTQEETEQ
LAVAYYVLSSHYEKYRPRCRELFYDIYKHYRKISIEKAENESEQTERPKLKSSALDKLDFLLNVNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44895; Mature: 44764

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKANNKQVLQGSDGVTTTSKKVKTDKFDVHPEAQLPQTYKKNHNLIYSRISMTTHEQN
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCHHH
LLALFLIQMQKTEWKEETQLEISIPASRLADWLEVESKSLAATIKPVALRLQKRTVLAEH
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PTTHEFESSVLFPTVKYARGKLTMVPNYDLRDFFHDASKGYASVNVARFLRLRGKYSKPM
CCCCCCCCCCCCCCHHHCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
YDLLSRFKTPEKQLYKTDVMTLKGIFGLVDDKDNYLPGKKTMKDTSVFVNQALVKSIEEI
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EEACSDEVMFFNTDPSGKKRHGIIENKTGNKITSIEFEYLWIDQFIKLHPMDLEAAAEVA
HHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHCCCCCHHHHHHHH
MNAENRLRMKKETLTQEETEQLAVAYYVLSSHYEKYRPRCRELFYDIYKHYRKISIEKAE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
NESEQTERPKLKSSALDKLDFLLNVNT
CCHHHHHCCCHHHHHHHHEEHEEECCC
>Mature Secondary Structure 
TDKANNKQVLQGSDGVTTTSKKVKTDKFDVHPEAQLPQTYKKNHNLIYSRISMTTHEQN
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCHHH
LLALFLIQMQKTEWKEETQLEISIPASRLADWLEVESKSLAATIKPVALRLQKRTVLAEH
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PTTHEFESSVLFPTVKYARGKLTMVPNYDLRDFFHDASKGYASVNVARFLRLRGKYSKPM
CCCCCCCCCCCCCCHHHCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
YDLLSRFKTPEKQLYKTDVMTLKGIFGLVDDKDNYLPGKKTMKDTSVFVNQALVKSIEEI
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EEACSDEVMFFNTDPSGKKRHGIIENKTGNKITSIEFEYLWIDQFIKLHPMDLEAAAEVA
HHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHCCCCCHHHHHHHH
MNAENRLRMKKETLTQEETEQLAVAYYVLSSHYEKYRPRCRELFYDIYKHYRKISIEKAE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
NESEQTERPKLKSSALDKLDFLLNVNT
CCHHHHHCCCHHHHHHHHEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA