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The map label for this gene is parB [H]

Identifier: 117676165

GI number: 117676165

Start: 97320

End: 98393

Strand: Reverse

Name: parB [H]

Synonym: Shewana3_4225

Alternate gene names: 117676165

Gene position: 98393-97320 (Counterclockwise)

Preceding gene: 117676166

Following gene: 117676160

Centisome position: 35.27

GC content: 40.5

Gene sequence:

>1074_bases
ATGGTATCTAATGCTAAAGAAGCGCGTAAGCGCGTTCCATTTGGCAGAGCCTTAGTTGACTCTGCTGGTTTAAATAGTCA
ATTACATCCAGAAACTACTGAGTCTGCATTTGTTGCTAATACTGATGTACTGAACGACTCTGCTACTTCAATTAAAATTA
AATTGTCCAGTGGGCGTACTCTTACATTCACTCGTAAGCACTTAACGGCGGAAGAACTCAAAACAAAGTCTTTCGTACAC
CCATTTAACCCGCGTCCAGCCGGTGATGTAAAACCAAATTCATTACTGCGGATCCGTAAAACTATTGCAAAGGTGCAATT
TTCTGATGCGTTGGCAACACGGGATTCAACTGGTTATCACTTGTTTGATGGTCAGCGCCGACGTATGGCAGCAATCTTAG
AGAATGCTGGATTAAATGTGCTGTATACCGATTTTGTACTAACAGAAGAAGAAGTTCACGAAATCGTTAAATACGTCCAA
ACCTCTGAAAAGTATAGTTATCGAGATGCGGGTTTTCAGATGAAAAAGGCACTCGCGAAAAACGAGCTCGAGATTGCCAA
CAACAAAACAGTTAAGTTATCTCTGAGAGAGCTAGCTGCTCAATTCGACGTATCTTATTCGTATGTAACGAGAGCACTTA
AAGCCGCAGAAATTCCAGATGAAATTATTGAGTTGTTCCCCTGCCCTTCTGCTTTAAGTTCAACACAAATTATGGCTCTT
TATGACATTACTCAAAAGCATCAACTTTCAGCTTTATTGAGCGAGCAGTTACTTGAGAAAATTGAAAACATTTGCATCGA
TGCAAATGAAGGCGAAACATCGGTAGCGGGACTATTTGATGTCGATGGCCAGAAAAACAGTCAGATACTGAAGGTGTTCG
AAGACTTTGATAAACAATCAAAACCCAAAAAGCTGGCAAATGATAAAATTGCCGAGGGTGACGACCGCAATCGTTGGGCT
AAATTATCGACCCAAAATCGAAAGACCAAGGTCGAAGTAACAAGATTGTCGGAGCAAGAGATTGAGAAGCTAAAACAATT
CTTAATTGATTTAGTAGAAGCAAAAAACCAGTAG

Upstream 100 bases:

>100_bases
TACACAGGGGACTCAAAAGCTCTTAAAAAAGCAAGAGAGTCGCTAGACCAATTTACTTTGGCGCTATTCCAACACATTTC
AAGAATTAGAGGTTCAGAAT

Downstream 100 bases:

>100_bases
TAAAAGAAACTGACAGGCCGACCGCCAAGCCTGACCTGTCATGCACTAACAAACATACTTATTCGGAGTATTTATGTCAG
CAGAAGTGATGTTAACACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MVSNAKEARKRVPFGRALVDSAGLNSQLHPETTESAFVANTDVLNDSATSIKIKLSSGRTLTFTRKHLTAEELKTKSFVH
PFNPRPAGDVKPNSLLRIRKTIAKVQFSDALATRDSTGYHLFDGQRRRMAAILENAGLNVLYTDFVLTEEEVHEIVKYVQ
TSEKYSYRDAGFQMKKALAKNELEIANNKTVKLSLRELAAQFDVSYSYVTRALKAAEIPDEIIELFPCPSALSSTQIMAL
YDITQKHQLSALLSEQLLEKIENICIDANEGETSVAGLFDVDGQKNSQILKVFEDFDKQSKPKKLANDKIAEGDDRNRWA
KLSTQNRKTKVEVTRLSEQEIEKLKQFLIDLVEAKNQ

Sequences:

>Translated_357_residues
MVSNAKEARKRVPFGRALVDSAGLNSQLHPETTESAFVANTDVLNDSATSIKIKLSSGRTLTFTRKHLTAEELKTKSFVH
PFNPRPAGDVKPNSLLRIRKTIAKVQFSDALATRDSTGYHLFDGQRRRMAAILENAGLNVLYTDFVLTEEEVHEIVKYVQ
TSEKYSYRDAGFQMKKALAKNELEIANNKTVKLSLRELAAQFDVSYSYVTRALKAAEIPDEIIELFPCPSALSSTQIMAL
YDITQKHQLSALLSEQLLEKIENICIDANEGETSVAGLFDVDGQKNSQILKVFEDFDKQSKPKKLANDKIAEGDDRNRWA
KLSTQNRKTKVEVTRLSEQEIEKLKQFLIDLVEAKNQ
>Mature_357_residues
MVSNAKEARKRVPFGRALVDSAGLNSQLHPETTESAFVANTDVLNDSATSIKIKLSSGRTLTFTRKHLTAEELKTKSFVH
PFNPRPAGDVKPNSLLRIRKTIAKVQFSDALATRDSTGYHLFDGQRRRMAAILENAGLNVLYTDFVLTEEEVHEIVKYVQ
TSEKYSYRDAGFQMKKALAKNELEIANNKTVKLSLRELAAQFDVSYSYVTRALKAAEIPDEIIELFPCPSALSSTQIMAL
YDITQKHQLSALLSEQLLEKIENICIDANEGETSVAGLFDVDGQKNSQILKVFEDFDKQSKPKKLANDKIAEGDDRNRWA
KLSTQNRKTKVEVTRLSEQEIEKLKQFLIDLVEAKNQ

Specific function: Control of plasmid partitioning; required to recognize the cis-acting partition sites [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014884
- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF08775 ParB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 40171; Mature: 40171

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNAKEARKRVPFGRALVDSAGLNSQLHPETTESAFVANTDVLNDSATSIKIKLSSGRT
CCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCE
LTFTRKHLTAEELKTKSFVHPFNPRPAGDVKPNSLLRIRKTIAKVQFSDALATRDSTGYH
EEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LFDGQRRRMAAILENAGLNVLYTDFVLTEEEVHEIVKYVQTSEKYSYRDAGFQMKKALAK
EECCHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
NELEIANNKTVKLSLRELAAQFDVSYSYVTRALKAAEIPDEIIELFPCPSALSSTQIMAL
CCCEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCEEEEE
YDITQKHQLSALLSEQLLEKIENICIDANEGETSVAGLFDVDGQKNSQILKVFEDFDKQS
EHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
KPKKLANDKIAEGDDRNRWAKLSTQNRKTKVEVTRLSEQEIEKLKQFLIDLVEAKNQ
CCHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSNAKEARKRVPFGRALVDSAGLNSQLHPETTESAFVANTDVLNDSATSIKIKLSSGRT
CCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCE
LTFTRKHLTAEELKTKSFVHPFNPRPAGDVKPNSLLRIRKTIAKVQFSDALATRDSTGYH
EEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LFDGQRRRMAAILENAGLNVLYTDFVLTEEEVHEIVKYVQTSEKYSYRDAGFQMKKALAK
EECCHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
NELEIANNKTVKLSLRELAAQFDVSYSYVTRALKAAEIPDEIIELFPCPSALSSTQIMAL
CCCEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCEEEEE
YDITQKHQLSALLSEQLLEKIENICIDANEGETSVAGLFDVDGQKNSQILKVFEDFDKQS
EHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
KPKKLANDKIAEGDDRNRWAKLSTQNRKTKVEVTRLSEQEIEKLKQFLIDLVEAKNQ
CCHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3903163 [H]