Click here to switch to the map view.

The map label for this gene is 117676161

Identifier: 117676161

GI number: 117676161

Start: 93556

End: 94818

Strand: Direct

Name: 117676161

Synonym: Shewana3_4221

Alternate gene names: NA

Gene position: 93556-94818 (Clockwise)

Preceding gene: 117676157

Following gene: 117676162

Centisome position: 33.54

GC content: 44.02

Gene sequence:

>1263_bases
ATGAGTTCATTTGATTTTGATTTAGATGCGTTAAATTCTGCTATGAACGCATTTTTTGACCCTGCCAGCGTGAGCACGGT
TACCATCACCTGCCAGCAAACCTCAAGCATCATCCCTGCAAGCCTGACGCATTTAGTCAAGCCTGGTTATGTGGACGGCA
AACCACAATTCTTATCTGACACCGGTGAACTTATCGAAGGTGTTTACTCAGACATTCCAAACGATGTGTATCACTCATTA
GATGCCATTAGCTCAAGTCAGGTTAAGTGCTATGCAGATAGCCCAATGAAATACGAACAAGCGTATATCAACGGTAAAGG
TAAACAGTTCAGCGCCAAATCCCGCGAGTCCGGTGTTTTAAGCCACGAATTAACACTAGAGGGAGCCGATGTATTTAATG
CTCGCAGATTTGCCCTGCTCGACTCAGAGCAATTCCCAGATGATCCAAAGTCATTAACCGAGCTTAAAGATGCCTGCACA
GCCAACAAACTAACAACCAGCGGCACCATTGCTGAATTAATCAAACGCCTTGAGCAAGCCAACGCTCCGCAAAAACCGTT
TGAGTCACGTCAATTGGAGTGGATCAAAGCGAACATTGGTGACGAGTGTTTTGCGTTATGTGATACAGAACTACAGTCAG
CGGTGACCTGTGCAGCAATCATTAAATTACTTCAGGATAATCAACATATCGCGATGAAGGCGCTTAAGCTGCCAGTGTCA
AAGGAGATGTTTGATAGCGTTATAGGACTCAATCAAGCCATTGAACGCAACGCTCACGCGAACAAATTTTTAAATCGTAA
AAACGGTATGGCGGAGGTCGCATTCTTTACAAGAGATCCTGAGACCGGATTGATGCTTAAGTGCAAAGTGGATTGGTTAA
CAGCCGTTAAAAATTTCATTGTTCCTTGCGATTTGAAAACCACGCGCAGTGCTAACCCAGCGTTAGCGGCCTACCAGTTC
GCAGACTTACGTTACGATTTGCAAGCTGTGTTTTACTTAAAAGTGATTAAGCCACATTTGAAAGAAACCGAGTATGCAGA
GCGTCTATTCCCACTCATCACCGTTGAAACGGGTGATTGTGCAATTTGTGAAGTGTTTGAGCTTCACGATGATGATTGGG
TTATCGCTGAGCAAGATCTGCCAATCATTCTTCAGAATATGAAAAATAGCATTAAGAAAAACGAGTACCGAGGCTACACC
GAACAAGGTAAGTCTGTTATCAAATTGGCAAGACGCAAATCTTCTCTGGCTGCAACTCGATAG

Upstream 100 bases:

>100_bases
CTTGCGGGCATTTTTTTGCTCCATTTCTAGAAATTTGCCTCAATTGGAAGCCGTGTAATGATGGTTTCAATTGAAGAGTT
AGATTTTTGGAGTGAGTATC

Downstream 100 bases:

>100_bases
GGTGGTGAAGGAATATGAATCTGCAACTCAAAGCACTTAAGGCTATTTACGACAAAAAACCTCACTTGGTGGCCAAGTAC
ATCTCAGCAGGGCTCACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSSFDFDLDALNSAMNAFFDPASVSTVTITCQQTSSIIPASLTHLVKPGYVDGKPQFLSDTGELIEGVYSDIPNDVYHSL
DAISSSQVKCYADSPMKYEQAYINGKGKQFSAKSRESGVLSHELTLEGADVFNARRFALLDSEQFPDDPKSLTELKDACT
ANKLTTSGTIAELIKRLEQANAPQKPFESRQLEWIKANIGDECFALCDTELQSAVTCAAIIKLLQDNQHIAMKALKLPVS
KEMFDSVIGLNQAIERNAHANKFLNRKNGMAEVAFFTRDPETGLMLKCKVDWLTAVKNFIVPCDLKTTRSANPALAAYQF
ADLRYDLQAVFYLKVIKPHLKETEYAERLFPLITVETGDCAICEVFELHDDDWVIAEQDLPIILQNMKNSIKKNEYRGYT
EQGKSVIKLARRKSSLAATR

Sequences:

>Translated_420_residues
MSSFDFDLDALNSAMNAFFDPASVSTVTITCQQTSSIIPASLTHLVKPGYVDGKPQFLSDTGELIEGVYSDIPNDVYHSL
DAISSSQVKCYADSPMKYEQAYINGKGKQFSAKSRESGVLSHELTLEGADVFNARRFALLDSEQFPDDPKSLTELKDACT
ANKLTTSGTIAELIKRLEQANAPQKPFESRQLEWIKANIGDECFALCDTELQSAVTCAAIIKLLQDNQHIAMKALKLPVS
KEMFDSVIGLNQAIERNAHANKFLNRKNGMAEVAFFTRDPETGLMLKCKVDWLTAVKNFIVPCDLKTTRSANPALAAYQF
ADLRYDLQAVFYLKVIKPHLKETEYAERLFPLITVETGDCAICEVFELHDDDWVIAEQDLPIILQNMKNSIKKNEYRGYT
EQGKSVIKLARRKSSLAATR
>Mature_419_residues
SSFDFDLDALNSAMNAFFDPASVSTVTITCQQTSSIIPASLTHLVKPGYVDGKPQFLSDTGELIEGVYSDIPNDVYHSLD
AISSSQVKCYADSPMKYEQAYINGKGKQFSAKSRESGVLSHELTLEGADVFNARRFALLDSEQFPDDPKSLTELKDACTA
NKLTTSGTIAELIKRLEQANAPQKPFESRQLEWIKANIGDECFALCDTELQSAVTCAAIIKLLQDNQHIAMKALKLPVSK
EMFDSVIGLNQAIERNAHANKFLNRKNGMAEVAFFTRDPETGLMLKCKVDWLTAVKNFIVPCDLKTTRSANPALAAYQFA
DLRYDLQAVFYLKVIKPHLKETEYAERLFPLITVETGDCAICEVFELHDDDWVIAEQDLPIILQNMKNSIKKNEYRGYTE
QGKSVIKLARRKSSLAATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46828; Mature: 46697

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFDFDLDALNSAMNAFFDPASVSTVTITCQQTSSIIPASLTHLVKPGYVDGKPQFLSD
CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHH
TGELIEGVYSDIPNDVYHSLDAISSSQVKCYADSPMKYEQAYINGKGKQFSAKSRESGVL
HHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCHHHEECCCCCCCCCCCHHCCCE
SHELTLEGADVFNARRFALLDSEQFPDDPKSLTELKDACTANKLTTSGTIAELIKRLEQA
EEEEEECCCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
NAPQKPFESRQLEWIKANIGDECFALCDTELQSAVTCAAIIKLLQDNQHIAMKALKLPVS
CCCCCCCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
KEMFDSVIGLNQAIERNAHANKFLNRKNGMAEVAFFTRDPETGLMLKCKVDWLTAVKNFI
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHE
VPCDLKTTRSANPALAAYQFADLRYDLQAVFYLKVIKPHLKETEYAERLFPLITVETGDC
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCE
AICEVFELHDDDWVIAEQDLPIILQNMKNSIKKNEYRGYTEQGKSVIKLARRKSSLAATR
EEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSFDFDLDALNSAMNAFFDPASVSTVTITCQQTSSIIPASLTHLVKPGYVDGKPQFLSD
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHH
TGELIEGVYSDIPNDVYHSLDAISSSQVKCYADSPMKYEQAYINGKGKQFSAKSRESGVL
HHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCHHHEECCCCCCCCCCCHHCCCE
SHELTLEGADVFNARRFALLDSEQFPDDPKSLTELKDACTANKLTTSGTIAELIKRLEQA
EEEEEECCCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
NAPQKPFESRQLEWIKANIGDECFALCDTELQSAVTCAAIIKLLQDNQHIAMKALKLPVS
CCCCCCCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
KEMFDSVIGLNQAIERNAHANKFLNRKNGMAEVAFFTRDPETGLMLKCKVDWLTAVKNFI
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHE
VPCDLKTTRSANPALAAYQFADLRYDLQAVFYLKVIKPHLKETEYAERLFPLITVETGDC
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCE
AICEVFELHDDDWVIAEQDLPIILQNMKNSIKKNEYRGYTEQGKSVIKLARRKSSLAATR
EEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA