Click here to switch to the map view.

The map label for this gene is 117676152

Identifier: 117676152

GI number: 117676152

Start: 79601

End: 80062

Strand: Reverse

Name: 117676152

Synonym: Shewana3_4212

Alternate gene names: NA

Gene position: 80062-79601 (Counterclockwise)

Preceding gene: 117676153

Following gene: 117676151

Centisome position: 28.7

GC content: 45.24

Gene sequence:

>462_bases
ATGGCAGTTCAACAATTACGTGAGTTCAGATTAAAACCTAAAGTACATCAATCTATCTGGGCTAAAGTGGGGTTGCCTGC
TGGCGAAGGCCCTGTGCTAAGTGACGCAATTAATCATGGGTTTAGTATTGATGTTGTGAATCGCTTTGCCGAAGCCGTTT
CCATGCCCGTTACGAACCTTGTCCAGTATGCCGGTTTAAGCCGGGCAACCTTCGCCCGTCGGGTAAAGGATAAAGAACAT
CGACTGAAGCCTAGTGAAAGCGAAGCGTTTGCACGGATGATACGAATGTATGAAGCAGCAACTTTGATGCTTGGTGGAAA
CAAGGCAGATGCTATTCAATGGCTCAATGAACCCGCAATTGGATTGAACGGTAAAAGACCAATTGAGTTAATGGGCTCTG
AGTCGGGCACAGTAGATGTCATTCGTCTAATTAATAGATTAATGCACGGAGTTTACATGTGA

Upstream 100 bases:

>100_bases
ATTTTTTATAACTAGATTATCATGTGAGACATTAAAATTTGTCAAATGAGACTTGTAGTGCGATAATTATTCATAAATTT
GGAATGCAGGAGTCATTGAT

Downstream 100 bases:

>100_bases
AGCTCTATCGCATTGTATCAAAGCAGTACGTGGATTCTGCATGGAATGGACAAGGGGCTGCAATGTATGGGGGGCGCTGG
AACTCATTGGGAGTACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAVQQLREFRLKPKVHQSIWAKVGLPAGEGPVLSDAINHGFSIDVVNRFAEAVSMPVTNLVQYAGLSRATFARRVKDKEH
RLKPSESEAFARMIRMYEAATLMLGGNKADAIQWLNEPAIGLNGKRPIELMGSESGTVDVIRLINRLMHGVYM

Sequences:

>Translated_153_residues
MAVQQLREFRLKPKVHQSIWAKVGLPAGEGPVLSDAINHGFSIDVVNRFAEAVSMPVTNLVQYAGLSRATFARRVKDKEH
RLKPSESEAFARMIRMYEAATLMLGGNKADAIQWLNEPAIGLNGKRPIELMGSESGTVDVIRLINRLMHGVYM
>Mature_152_residues
AVQQLREFRLKPKVHQSIWAKVGLPAGEGPVLSDAINHGFSIDVVNRFAEAVSMPVTNLVQYAGLSRATFARRVKDKEHR
LKPSESEAFARMIRMYEAATLMLGGNKADAIQWLNEPAIGLNGKRPIELMGSESGTVDVIRLINRLMHGVYM

Specific function: Unknown

COG id: COG5642

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17001; Mature: 16870

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQQLREFRLKPKVHQSIWAKVGLPAGEGPVLSDAINHGFSIDVVNRFAEAVSMPVTNL
CCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHH
VQYAGLSRATFARRVKDKEHRLKPSESEAFARMIRMYEAATLMLGGNKADAIQWLNEPAI
HHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCC
GLNGKRPIELMGSESGTVDVIRLINRLMHGVYM
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVQQLREFRLKPKVHQSIWAKVGLPAGEGPVLSDAINHGFSIDVVNRFAEAVSMPVTNL
CHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHH
VQYAGLSRATFARRVKDKEHRLKPSESEAFARMIRMYEAATLMLGGNKADAIQWLNEPAI
HHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCC
GLNGKRPIELMGSESGTVDVIRLINRLMHGVYM
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA