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The map label for this gene is traW [C]

Identifier: 117676148

GI number: 117676148

Start: 76728

End: 78023

Strand: Reverse

Name: traW [C]

Synonym: Shewana3_4208

Alternate gene names: 117676148

Gene position: 78023-76728 (Counterclockwise)

Preceding gene: 117676149

Following gene: 117676147

Centisome position: 27.97

GC content: 47.69

Gene sequence:

>1296_bases
GTGCTTACCTCATTATCTAATAGACAGTTTCTTGTTAGCTTGTTTGTGGCGGTATCGATGTCTGCCATTTATTTCGATGC
AATGGCTACAGACGATAATCAGCAGTTTATTCTGGATGCAAAACGACAGATGGATGACGTCCGTAGCCAAATCGAGGCTA
TGAGGCAGAACAATACCCAGCAGCCCCAAGGTGGCCTCCCCGCTGCTTGGGGGCAGCAATCTTACATTTCACAAGCACAA
ATGCTCACCCAGCAGGCCGATGCGATCAGGTATCAAGTGCTGCCAAAGCCAGAACCTGTCACGCCTGTTGTGCAGCAAGA
GATAGCCGCAAACGGAGAGGTATTCATTTTCGCTTCATTCGGTATGCCAGCATACACGCTGAAATCAGCGCTGAGAGCAG
CATCTCAAAGCCAAGTTAAAACAACAGTCGTATTTAGAGGCCTGAAAGATGAATCTGAAAGCCTGCGTGATGCCTCCAAC
GCCATTCATAGAGCGATAGATGAAGCAGATTTAGATGTGACTCCAAGAGTTATCATCGACCCTCGTTTGTTTAATACCTA
TGCAGTCGAAGTAGCGCCAACAATGGTGTATCGCAACGGTGGCAAAGTGGTTACCGCGACAGGGCTACAGTCATTAGAAG
ATTTCGTTAAGCAGTCCGAAGGCTTGTTGCAAAGCGGCTCGCTCGGGAAGTTGTCAGACACTTACGACATTACTGAGATG
GACATGCTCGAACTTATCCAACAGAAGCTCAAAAAAGTAGATTGGGAAGAGAAAAAGCACGAGGCCGTTAGCCGATTCGT
TAACCGTAAAGAGGTTCAGTTGACAGAGAGCCTTAAAGACGAGGATGTGCGTTACAAAATTGACCCGCGTGTTCGCTTTA
CCCAAGACCAAACAACGCCGGATGGCCAGTATTTTGCCAAGGCCGGTGATGTTGTAGATCCTACAGCATTACTCCAAATG
GAAACCCGCTTATTCATGATTGACCCAACCAGTGAGCGTCAGCTGGCGTGGATGAATGATGTACTTTCCGTGACAGATCA
CAAGCAAGTTTACGTGCTGCTATCAGCTCTGCCAGCGGGTAGCGATTTAACCGAATTTAACCGGTTGCAGACAAAACTAG
GCCGTCGCTTGTACTTGATGCAACCGACGATGGTGTCTCGTTTTCAGCTTGAGCATTTACCCGCATTAGTTGATTTGTTT
AAGGGAGAAATCCGCGTCACTGAGATTGGTCAACGAACTCTGAGTAATGCGGGATTACCGACACTATTAGTAGCTCCAAA
TGGCGGTGCCAAATGA

Upstream 100 bases:

>100_bases
AGGACTGTAGAGAATGGCGGGATCTTTGTGTTAGGCACAGAACCTGGCAGTTATGACAGTCGTTTCTTTGGTTCAATCAA
AACTCAGCAGGTGATTGGTC

Downstream 100 bases:

>100_bases
TGAAGAAGTTCGCAAAAGTAGCTGTTTTTCTGGCTTCCATGATGTCCGTAAATGTGAGTGCGAACAGTATGCCGGACTCG
GTTTGCCCCGATGCTGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Pilus Biogenesis Protein; Transfer Protein Pilus Formation'

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLTSLSNRQFLVSLFVAVSMSAIYFDAMATDDNQQFILDAKRQMDDVRSQIEAMRQNNTQQPQGGLPAAWGQQSYISQAQ
MLTQQADAIRYQVLPKPEPVTPVVQQEIAANGEVFIFASFGMPAYTLKSALRAASQSQVKTTVVFRGLKDESESLRDASN
AIHRAIDEADLDVTPRVIIDPRLFNTYAVEVAPTMVYRNGGKVVTATGLQSLEDFVKQSEGLLQSGSLGKLSDTYDITEM
DMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDVRYKIDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQM
ETRLFMIDPTSERQLAWMNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQPTMVSRFQLEHLPALVDLF
KGEIRVTEIGQRTLSNAGLPTLLVAPNGGAK

Sequences:

>Translated_431_residues
MLTSLSNRQFLVSLFVAVSMSAIYFDAMATDDNQQFILDAKRQMDDVRSQIEAMRQNNTQQPQGGLPAAWGQQSYISQAQ
MLTQQADAIRYQVLPKPEPVTPVVQQEIAANGEVFIFASFGMPAYTLKSALRAASQSQVKTTVVFRGLKDESESLRDASN
AIHRAIDEADLDVTPRVIIDPRLFNTYAVEVAPTMVYRNGGKVVTATGLQSLEDFVKQSEGLLQSGSLGKLSDTYDITEM
DMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDVRYKIDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQM
ETRLFMIDPTSERQLAWMNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQPTMVSRFQLEHLPALVDLF
KGEIRVTEIGQRTLSNAGLPTLLVAPNGGAK
>Mature_431_residues
MLTSLSNRQFLVSLFVAVSMSAIYFDAMATDDNQQFILDAKRQMDDVRSQIEAMRQNNTQQPQGGLPAAWGQQSYISQAQ
MLTQQADAIRYQVLPKPEPVTPVVQQEIAANGEVFIFASFGMPAYTLKSALRAASQSQVKTTVVFRGLKDESESLRDASN
AIHRAIDEADLDVTPRVIIDPRLFNTYAVEVAPTMVYRNGGKVVTATGLQSLEDFVKQSEGLLQSGSLGKLSDTYDITEM
DMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDVRYKIDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQM
ETRLFMIDPTSERQLAWMNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQPTMVSRFQLEHLPALVDLF
KGEIRVTEIGQRTLSNAGLPTLLVAPNGGAK

Specific function: Involved In F-Pilus Assembly. Required For F Plasmid Conjugative Transfer. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48305; Mature: 48305

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLSNRQFLVSLFVAVSMSAIYFDAMATDDNQQFILDAKRQMDDVRSQIEAMRQNNTQ
CCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
QPQGGLPAAWGQQSYISQAQMLTQQADAIRYQVLPKPEPVTPVVQQEIAANGEVFIFASF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCEEEEEEC
GMPAYTLKSALRAASQSQVKTTVVFRGLKDESESLRDASNAIHRAIDEADLDVTPRVIID
CCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
PRLFNTYAVEVAPTMVYRNGGKVVTATGLQSLEDFVKQSEGLLQSGSLGKLSDTYDITEM
CCCCCEEEEEEEEEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
DMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDVRYKIDPRVRFTQDQTTP
HHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEECCCEEEECCCCCC
DGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQLAWMNDVLSVTDHKQVYVLLSALPAG
CCHHHHCCCCCCCCHHHHEEECEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
SDLTEFNRLQTKLGRRLYLMQPTMVSRFQLEHLPALVDLFKGEIRVTEIGQRTLSNAGLP
CCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCC
TLLVAPNGGAK
EEEECCCCCCC
>Mature Secondary Structure
MLTSLSNRQFLVSLFVAVSMSAIYFDAMATDDNQQFILDAKRQMDDVRSQIEAMRQNNTQ
CCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
QPQGGLPAAWGQQSYISQAQMLTQQADAIRYQVLPKPEPVTPVVQQEIAANGEVFIFASF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCEEEEEEC
GMPAYTLKSALRAASQSQVKTTVVFRGLKDESESLRDASNAIHRAIDEADLDVTPRVIID
CCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
PRLFNTYAVEVAPTMVYRNGGKVVTATGLQSLEDFVKQSEGLLQSGSLGKLSDTYDITEM
CCCCCEEEEEEEEEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
DMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDVRYKIDPRVRFTQDQTTP
HHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEECCCEEEECCCCCC
DGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQLAWMNDVLSVTDHKQVYVLLSALPAG
CCHHHHCCCCCCCCHHHHEEECEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
SDLTEFNRLQTKLGRRLYLMQPTMVSRFQLEHLPALVDLFKGEIRVTEIGQRTLSNAGLP
CCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCC
TLLVAPNGGAK
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA