Click here to switch to the map view.

The map label for this gene is 117676140

Identifier: 117676140

GI number: 117676140

Start: 62291

End: 63763

Strand: Reverse

Name: 117676140

Synonym: Shewana3_4200

Alternate gene names: NA

Gene position: 63763-62291 (Counterclockwise)

Preceding gene: 117676141

Following gene: 117676139

Centisome position: 22.86

GC content: 46.5

Gene sequence:

>1473_bases
ATGGTTTGCTCGTTACTTCACGAGTCGGCCCATCTCAATCACACCAACTTCAGTGCAATCGGAAACGTCATGCAGCAGAC
CAGTACAGCGTTGAAAAACGCAATCAACGTGCTTGAGGACATAAGAATCGACTTGCGCAATATCAGGGAATTTCCTGGCG
CAATACAGTCTTATCAATCAAGCCGAAGAATATTGGTAGACATCATTACCAAGCGTGAGTTTACAAACTGTCTCGACGAC
ATTTTGTATTACGTACTTCTAGTCGGAAACCTTGAAAACGGGATTACTGCGATCAAACCAGCATTAGCTGGATTTGATTG
GGTAACACTGGAGCTTGATAAGTTGTGTTTGAAATACGCACAGCTTGCACAAACGGCGAAAGACACCTTAGAAGTGCGTG
AGTTGGCAGAAAACCTTCTGTTAGAGCTTGCGGCAATGCAACAGGCTAATCAGCAAGAAGCTGAAGGTGAAGCTGAAGGT
GAAGGTGAAGCTGAAGGTGAAGCGGAAGGTGAAGGTGAAGCGGAAGGTGATGCTGAAGGTGATGCTGAAGGTGATGCTGA
AGGTGAAAGCAACGGCAAGCCAAGCGGTAAGGCTCTTAGCAATAGCGCAGGGTTCAACGAAATCGATTTGGAGCAACCTT
TCGAGGACTTGGACGTAGGCAAACTGTTAGAGGCTCACCGAGATCAGCAAGATATGAGTAACTATTCTCGTGTTCCTAAA
CCAATCAAAGTCATTCCTTACACTGTGCAGGAGTTGTTGCGTGGTAATCCAAACAGTGTTTTCCCTGCGGCAAATCTGCA
GGTGAATGGCGCTGTCACCAATGCTATTAAGGTCATGTTTCGACAACGAAACATGAAATTATCCGGCGTGACGCAGTTTG
GAGAGTTAGACGAGGATCGGTTGGTCGATGCTTATCTGGGTAACCCTGGCGCCAAAAACATCCGTCGTGATGTCGCGGCA
AACCTATCTGTAGGTGTGTTGCTTGATGCTTCAGGTTCTATGGGGTATCCGGATGACGATACACACCGCTCTTGTGTAGC
AACAAAAGCGGCAATGGCAATGACACAGGCTCTTGAAAAACAGAGTGGTGTTTTGACGTCATTATCGCTGTTTGGTGAGT
TTTATCTTGAGCTAAAAGGTTTTGCTCAGAAGAAAACACCTTCGGTCTTGCCCTATTCAGACCTCGGCGGCACAAGCACT
GGAGCTGCGATGATGGAAATGGGCAGCAAGCTCATTTTACAGTCATCGCAAAAAAAGGTGATGTTTGTGATTACCGATGG
TCAACCAGACTGTCCGCATGAAGTGGTTGGTTCACTCGATTGGTTAGCTCAGCATGGCGTTGTGGTTTTGCCTGTCATCA
TTGGTCAGGTGGACGTAAGGTTTACTGGTTTTAAAGACCTGAAAGTAGCCTGTATCGACCACGTCAACGAGTTACCGAAA
CAGTTAATGCAGTTGCTTAAGCAACACATTTAA

Upstream 100 bases:

>100_bases
GAATGCGTTAACTCGCAAAGGCGTTAACGTCACGATTGCTGGTGGCAGTTCTTACACCAACGGTAAAAGAATTGTCATTG
GGGTTGGCCCGTGGGATCAG

Downstream 100 bases:

>100_bases
CACAATTAATCCCTAGAGGGGCGTACTTCCCCTCTAGGGAGAAGTGCGCCATTTAGCGCATGAATACGCAGTTTGATTGC
TTCCCTGCAATCGCTCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MVCSLLHESAHLNHTNFSAIGNVMQQTSTALKNAINVLEDIRIDLRNIREFPGAIQSYQSSRRILVDIITKREFTNCLDD
ILYYVLLVGNLENGITAIKPALAGFDWVTLELDKLCLKYAQLAQTAKDTLEVRELAENLLLELAAMQQANQQEAEGEAEG
EGEAEGEAEGEGEAEGDAEGDAEGDAEGESNGKPSGKALSNSAGFNEIDLEQPFEDLDVGKLLEAHRDQQDMSNYSRVPK
PIKVIPYTVQELLRGNPNSVFPAANLQVNGAVTNAIKVMFRQRNMKLSGVTQFGELDEDRLVDAYLGNPGAKNIRRDVAA
NLSVGVLLDASGSMGYPDDDTHRSCVATKAAMAMTQALEKQSGVLTSLSLFGEFYLELKGFAQKKTPSVLPYSDLGGTST
GAAMMEMGSKLILQSSQKKVMFVITDGQPDCPHEVVGSLDWLAQHGVVVLPVIIGQVDVRFTGFKDLKVACIDHVNELPK
QLMQLLKQHI

Sequences:

>Translated_490_residues
MVCSLLHESAHLNHTNFSAIGNVMQQTSTALKNAINVLEDIRIDLRNIREFPGAIQSYQSSRRILVDIITKREFTNCLDD
ILYYVLLVGNLENGITAIKPALAGFDWVTLELDKLCLKYAQLAQTAKDTLEVRELAENLLLELAAMQQANQQEAEGEAEG
EGEAEGEAEGEGEAEGDAEGDAEGDAEGESNGKPSGKALSNSAGFNEIDLEQPFEDLDVGKLLEAHRDQQDMSNYSRVPK
PIKVIPYTVQELLRGNPNSVFPAANLQVNGAVTNAIKVMFRQRNMKLSGVTQFGELDEDRLVDAYLGNPGAKNIRRDVAA
NLSVGVLLDASGSMGYPDDDTHRSCVATKAAMAMTQALEKQSGVLTSLSLFGEFYLELKGFAQKKTPSVLPYSDLGGTST
GAAMMEMGSKLILQSSQKKVMFVITDGQPDCPHEVVGSLDWLAQHGVVVLPVIIGQVDVRFTGFKDLKVACIDHVNELPK
QLMQLLKQHI
>Mature_490_residues
MVCSLLHESAHLNHTNFSAIGNVMQQTSTALKNAINVLEDIRIDLRNIREFPGAIQSYQSSRRILVDIITKREFTNCLDD
ILYYVLLVGNLENGITAIKPALAGFDWVTLELDKLCLKYAQLAQTAKDTLEVRELAENLLLELAAMQQANQQEAEGEAEG
EGEAEGEAEGEGEAEGDAEGDAEGDAEGESNGKPSGKALSNSAGFNEIDLEQPFEDLDVGKLLEAHRDQQDMSNYSRVPK
PIKVIPYTVQELLRGNPNSVFPAANLQVNGAVTNAIKVMFRQRNMKLSGVTQFGELDEDRLVDAYLGNPGAKNIRRDVAA
NLSVGVLLDASGSMGYPDDDTHRSCVATKAAMAMTQALEKQSGVLTSLSLFGEFYLELKGFAQKKTPSVLPYSDLGGTST
GAAMMEMGSKLILQSSQKKVMFVITDGQPDCPHEVVGSLDWLAQHGVVVLPVIIGQVDVRFTGFKDLKVACIDHVNELPK
QLMQLLKQHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53353; Mature: 53353

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCSLLHESAHLNHTNFSAIGNVMQQTSTALKNAINVLEDIRIDLRNIREFPGAIQSYQS
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
SRRILVDIITKREFTNCLDDILYYVLLVGNLENGITAIKPALAGFDWVTLELDKLCLKYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHH
QLAQTAKDTLEVRELAENLLLELAAMQQANQQEAEGEAEGEGEAEGEAEGEGEAEGDAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAEGDAEGESNGKPSGKALSNSAGFNEIDLEQPFEDLDVGKLLEAHRDQQDMSNYSRVPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHHHCCCC
PIKVIPYTVQELLRGNPNSVFPAANLQVNGAVTNAIKVMFRQRNMKLSGVTQFGELDEDR
CCEECCHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHH
LVDAYLGNPGAKNIRRDVAANLSVGVLLDASGSMGYPDDDTHRSCVATKAAMAMTQALEK
HHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QSGVLTSLSLFGEFYLELKGFAQKKTPSVLPYSDLGGTSTGAAMMEMGSKLILQSSQKKV
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCCCCEE
MFVITDGQPDCPHEVVGSLDWLAQHGVVVLPVIIGQVDVRFTGFKDLKVACIDHVNELPK
EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHCCEEEEEECCCHHHHHHHHHHHHHHH
QLMQLLKQHI
HHHHHHHHCC
>Mature Secondary Structure
MVCSLLHESAHLNHTNFSAIGNVMQQTSTALKNAINVLEDIRIDLRNIREFPGAIQSYQS
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
SRRILVDIITKREFTNCLDDILYYVLLVGNLENGITAIKPALAGFDWVTLELDKLCLKYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHH
QLAQTAKDTLEVRELAENLLLELAAMQQANQQEAEGEAEGEGEAEGEAEGEGEAEGDAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAEGDAEGESNGKPSGKALSNSAGFNEIDLEQPFEDLDVGKLLEAHRDQQDMSNYSRVPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHHHCCCC
PIKVIPYTVQELLRGNPNSVFPAANLQVNGAVTNAIKVMFRQRNMKLSGVTQFGELDEDR
CCEECCHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHH
LVDAYLGNPGAKNIRRDVAANLSVGVLLDASGSMGYPDDDTHRSCVATKAAMAMTQALEK
HHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QSGVLTSLSLFGEFYLELKGFAQKKTPSVLPYSDLGGTSTGAAMMEMGSKLILQSSQKKV
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCCCCEE
MFVITDGQPDCPHEVVGSLDWLAQHGVVVLPVIIGQVDVRFTGFKDLKVACIDHVNELPK
EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHCCEEEEEECCCHHHHHHHHHHHHHHH
QLMQLLKQHI
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA