| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676114
Identifier: 117676114
GI number: 117676114
Start: 40552
End: 40911
Strand: Reverse
Name: 117676114
Synonym: Shewana3_4174
Alternate gene names: NA
Gene position: 40911-40552 (Counterclockwise)
Preceding gene: 117676116
Following gene: 117676113
Centisome position: 14.67
GC content: 51.11
Gene sequence:
>360_bases ATGACCGAACTAGCAACTACGCCAACTGCACCGCGCAACCATGCAGAGGTCGCTATGTACCACTACTATCTGACCAATGC CGTGTTGACGACGAGCCCCAACGAGCAAGTCATTGGTGATGTGTTGGGGATGGGGGAAGATGACTTTGTGATGGAGCTGT TTGCGCTGTCTGAAGCGTTTTGGCTAAAAGGTGAAGATCTCTATGCCGAGGGTAAAGCGTTCTCAGGGCTTGCGGTATTC GACGTTGTGGCTGAGCTGGCTGAGTTCTTCTGGGGGTATGTAGAGCATACTGGAGAAATGCCTGACCTTGATGCGTTCAA GCTGGATATTGACCGAGTGTTTGAGACTTACACGCGATAA
Upstream 100 bases:
>100_bases TGTCTTGTATGGTGCTGATATAGAAGGGTAAATCCTGAAATTTGCCAGAATCGGCCGCCGTAATAGAATGTTCCTACATC AACTGAATGGGACAGAAAAA
Downstream 100 bases:
>100_bases ATCACCTGTCTAATACTCTTCAAAACAGTGAGGCCTACAACCCCGATGGTAGTAGGCCCAACTTCCAAGCAGTAGTTTCT AACCCTGTAATGGAGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTELATTPTAPRNHAEVAMYHYYLTNAVLTTSPNEQVIGDVLGMGEDDFVMELFALSEAFWLKGEDLYAEGKAFSGLAVF DVVAELAEFFWGYVEHTGEMPDLDAFKLDIDRVFETYTR
Sequences:
>Translated_119_residues MTELATTPTAPRNHAEVAMYHYYLTNAVLTTSPNEQVIGDVLGMGEDDFVMELFALSEAFWLKGEDLYAEGKAFSGLAVF DVVAELAEFFWGYVEHTGEMPDLDAFKLDIDRVFETYTR >Mature_118_residues TELATTPTAPRNHAEVAMYHYYLTNAVLTTSPNEQVIGDVLGMGEDDFVMELFALSEAFWLKGEDLYAEGKAFSGLAVFD VVAELAEFFWGYVEHTGEMPDLDAFKLDIDRVFETYTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13416; Mature: 13285
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELATTPTAPRNHAEVAMYHYYLTNAVLTTSPNEQVIGDVLGMGEDDFVMELFALSEAF CCCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHH WLKGEDLYAEGKAFSGLAVFDVVAELAEFFWGYVEHTGEMPDLDAFKLDIDRVFETYTR HCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TELATTPTAPRNHAEVAMYHYYLTNAVLTTSPNEQVIGDVLGMGEDDFVMELFALSEAF CCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHH WLKGEDLYAEGKAFSGLAVFDVVAELAEFFWGYVEHTGEMPDLDAFKLDIDRVFETYTR HCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA