| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676109
Identifier: 117676109
GI number: 117676109
Start: 34151
End: 35299
Strand: Direct
Name: 117676109
Synonym: Shewana3_4169
Alternate gene names: NA
Gene position: 34151-35299 (Clockwise)
Preceding gene: 117676104
Following gene: 117676110
Centisome position: 12.24
GC content: 47.87
Gene sequence:
>1149_bases ATGCCTTCTAATGCCTTTCTAACGATAGGAAAAGCCGCAGACGGAGAATTAATTAGTATCGATGCGGTGAAGAGTGGTAA AACTGACCTCTCCTGCCCCTTTTGTGCCGTGCCGTTGATCGCAGCAAAGGGGCTAGTCAATATTCATCACTTTCGTCATG ATGGCGAAACTTGCCATGAGTCACTGCAACAGCTGCCACAAATACCAGGCTGGGATCACTTTCACCTCTGCGTGCCGGAT TTCCTTGTTAATGTCTTACAGAATTACGCCGAAGCCCATCCTGGGGAAGTATTTTGGTATGAACCTAAGCATGTTCGTGA TCTGTTAAAGCACAATCTTATTGAGACCGACAGTTACACGGGTAAATATCGACTGACCGATGCCGCGTTAATCATCACCG GCCAACTATCGCTGAGTAAATTCAGCAACTGGTTTCGCCGCCAACTCACAGCCCGGATACATAGAAAATCGCAGTTAGTG GCTAACAACGAACTACATCGAGCACACTTTGAGATTGAGGCTTGGCGCCAACAACAGCTGATGGTAGCCACCACCTACTT ATTTGAGTTAACCCTAGACAATGGTGAAGTGATTTATAAGGTGGGCCGGACTCGTCGTGAGGTAGACGTGAGACTAGCTG AAGTTGAATCCGAGATGAAAGCCCACTTTAACCAGGGCATCTGCGCCAAAGTATTGCGGTTAATCCCTAACGGCGGTTAT CTGGAGCAGTATGTATTGTATCGATACCGGCTATCAAAGAGAGAGATAGGAAAACATCAAGAATATCTGAGCCTCGATGC GTCAGCATTGAAACAGCTTAAGGCGGCATTCACCCGCGCAGCCAATGACTTAGCCCCCTTCGATAAGGACGAGCGCTTTA TTGCATCTGGGCGTTGGCGTTACGAACCCAAGCGATTAGACGCGGTACGCAAAGGGATTAAGCAGACTGTAGAAAGTGGT AGCAGTTTCGGGCGCCCCAAGGGAACAACCAAGGTCGGCAGCGAGGAATGGCGCAAGCAGTATCAATATGTGATTGATCT GTTAGAGGCAGGCAATCTCTCTCAAGAGAAAATCGCCAGAATGACATTTAATAGCACCTCGACGGTGAAGCGAGTTAAAC AAGTTATATCCAAGGAAACGCCAGAATAA
Upstream 100 bases:
>100_bases CTTTATTATTCAACGTCACTCTTAATGACCTATTCATTGGCATTGGACACCATACTTATTTGAGCTATATTTATTGGAAA TTCTATAGGTTCAATTAAGT
Downstream 100 bases:
>100_bases GCGCGTCAGAGTTTAACGGAATTATCAGGTGTACTCCGTGCTCTTGCTTATTCCTTCCCCCTAGTTTGCATGATGGTCTA AATTGAATTATTTTGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MPSNAFLTIGKAADGELISIDAVKSGKTDLSCPFCAVPLIAAKGLVNIHHFRHDGETCHESLQQLPQIPGWDHFHLCVPD FLVNVLQNYAEAHPGEVFWYEPKHVRDLLKHNLIETDSYTGKYRLTDAALIITGQLSLSKFSNWFRRQLTARIHRKSQLV ANNELHRAHFEIEAWRQQQLMVATTYLFELTLDNGEVIYKVGRTRREVDVRLAEVESEMKAHFNQGICAKVLRLIPNGGY LEQYVLYRYRLSKREIGKHQEYLSLDASALKQLKAAFTRAANDLAPFDKDERFIASGRWRYEPKRLDAVRKGIKQTVESG SSFGRPKGTTKVGSEEWRKQYQYVIDLLEAGNLSQEKIARMTFNSTSTVKRVKQVISKETPE
Sequences:
>Translated_382_residues MPSNAFLTIGKAADGELISIDAVKSGKTDLSCPFCAVPLIAAKGLVNIHHFRHDGETCHESLQQLPQIPGWDHFHLCVPD FLVNVLQNYAEAHPGEVFWYEPKHVRDLLKHNLIETDSYTGKYRLTDAALIITGQLSLSKFSNWFRRQLTARIHRKSQLV ANNELHRAHFEIEAWRQQQLMVATTYLFELTLDNGEVIYKVGRTRREVDVRLAEVESEMKAHFNQGICAKVLRLIPNGGY LEQYVLYRYRLSKREIGKHQEYLSLDASALKQLKAAFTRAANDLAPFDKDERFIASGRWRYEPKRLDAVRKGIKQTVESG SSFGRPKGTTKVGSEEWRKQYQYVIDLLEAGNLSQEKIARMTFNSTSTVKRVKQVISKETPE >Mature_381_residues PSNAFLTIGKAADGELISIDAVKSGKTDLSCPFCAVPLIAAKGLVNIHHFRHDGETCHESLQQLPQIPGWDHFHLCVPDF LVNVLQNYAEAHPGEVFWYEPKHVRDLLKHNLIETDSYTGKYRLTDAALIITGQLSLSKFSNWFRRQLTARIHRKSQLVA NNELHRAHFEIEAWRQQQLMVATTYLFELTLDNGEVIYKVGRTRREVDVRLAEVESEMKAHFNQGICAKVLRLIPNGGYL EQYVLYRYRLSKREIGKHQEYLSLDASALKQLKAAFTRAANDLAPFDKDERFIASGRWRYEPKRLDAVRKGIKQTVESGS SFGRPKGTTKVGSEEWRKQYQYVIDLLEAGNLSQEKIARMTFNSTSTVKRVKQVISKETPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43747; Mature: 43616
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNAFLTIGKAADGELISIDAVKSGKTDLSCPFCAVPLIAAKGLVNIHHFRHDGETCHE CCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHHH SLQQLPQIPGWDHFHLCVPDFLVNVLQNYAEAHPGEVFWYEPKHVRDLLKHNLIETDSYT HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCC GKYRLTDAALIITGQLSLSKFSNWFRRQLTARIHRKSQLVANNELHRAHFEIEAWRQQQL CEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MVATTYLFELTLDNGEVIYKVGRTRREVDVRLAEVESEMKAHFNQGICAKVLRLIPNGGY HHEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCH LEQYVLYRYRLSKREIGKHQEYLSLDASALKQLKAAFTRAANDLAPFDKDERFIASGRWR HHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC YEPKRLDAVRKGIKQTVESGSSFGRPKGTTKVGSEEWRKQYQYVIDLLEAGNLSQEKIAR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH MTFNSTSTVKRVKQVISKETPE HHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSNAFLTIGKAADGELISIDAVKSGKTDLSCPFCAVPLIAAKGLVNIHHFRHDGETCHE CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHHH SLQQLPQIPGWDHFHLCVPDFLVNVLQNYAEAHPGEVFWYEPKHVRDLLKHNLIETDSYT HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCC GKYRLTDAALIITGQLSLSKFSNWFRRQLTARIHRKSQLVANNELHRAHFEIEAWRQQQL CEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MVATTYLFELTLDNGEVIYKVGRTRREVDVRLAEVESEMKAHFNQGICAKVLRLIPNGGY HHEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCH LEQYVLYRYRLSKREIGKHQEYLSLDASALKQLKAAFTRAANDLAPFDKDERFIASGRWR HHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC YEPKRLDAVRKGIKQTVESGSSFGRPKGTTKVGSEEWRKQYQYVIDLLEAGNLSQEKIAR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH MTFNSTSTVKRVKQVISKETPE HHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA