| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
Click here to switch to the map view.
The map label for this gene is insE1 [H]
Identifier: 117676099
GI number: 117676099
Start: 21137
End: 21307
Strand: Direct
Name: insE1 [H]
Synonym: Shewana3_4159
Alternate gene names: 117676099
Gene position: 21137-21307 (Clockwise)
Preceding gene: 117676098
Following gene: 117676100
Centisome position: 7.58
GC content: 42.69
Gene sequence:
>171_bases ATGTCAACGAAGAAACCCCGTAAAATCCACACGCAAGAATTTAAAGCTGAAGCCCTGAAGCTTGCTGATAAAATTGGTGT AGCGGCAGCGGCACGTGAACTCAATCTTTATGAGTCACAGCTATACAATTGGCGCTCAAGTGTCGAAAAGAAATCTAATC TGAACCAGTAA
Upstream 100 bases:
>100_bases AGCGCTAGCAGCAAGTAGGTGGTGGCTGAAAAGAATTTGATCTGATCCGCTACTTTTGGACATCTCGCTAAGTGAGTAAA ATCGCTTATTGAGGTGAAGT
Downstream 100 bases:
>100_bases TAGTGGACACTTTGTATTATTACTAAAATTTGGTCAATTAGCCTAAGGGAACTGGTGACAGCCTCAAGAGTTGTGCCTCT GAATGGGGCACGAACGTGTC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MSTKKPRKIHTQEFKAEALKLADKIGVAAAARELNLYESQLYNWRSSVEKKSNLNQ
Sequences:
>Translated_56_residues MSTKKPRKIHTQEFKAEALKLADKIGVAAAARELNLYESQLYNWRSSVEKKSNLNQ >Mature_55_residues STKKPRKIHTQEFKAEALKLADKIGVAAAARELNLYESQLYNWRSSVEKKSNLNQ
Specific function: Involved in the transposition of the insertion sequence IS3 [H]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
Organism=Escherichia coli, GI226510958, Length=45, Percent_Identity=75.5555555555556, Blast_Score=77, Evalue=2e-16, Organism=Escherichia coli, GI226510933, Length=45, Percent_Identity=75.5555555555556, Blast_Score=77, Evalue=2e-16, Organism=Escherichia coli, GI226510930, Length=45, Percent_Identity=75.5555555555556, Blast_Score=77, Evalue=2e-16, Organism=Escherichia coli, GI226510928, Length=45, Percent_Identity=75.5555555555556, Blast_Score=77, Evalue=2e-16, Organism=Escherichia coli, GI226510927, Length=45, Percent_Identity=75.5555555555556, Blast_Score=77, Evalue=2e-16,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 6434; Mature: 6303
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKKPRKIHTQEFKAEALKLADKIGVAAAARELNLYESQLYNWRSSVEKKSNLNQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STKKPRKIHTQEFKAEALKLADKIGVAAAARELNLYESQLYNWRSSVEKKSNLNQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987844; 9278503 [H]