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The map label for this gene is lspA [H]

Identifier: 117676092

GI number: 117676092

Start: 12547

End: 12888

Strand: Reverse

Name: lspA [H]

Synonym: Shewana3_4152

Alternate gene names: 117676092

Gene position: 12888-12547 (Counterclockwise)

Preceding gene: 117676093

Following gene: 117676091

Centisome position: 4.62

GC content: 49.12

Gene sequence:

>342_bases
ATGGCGAACTCTAACCCGACAAACACCTTTTGTGGTTGGCTGTGTCTTTCCGGTTTGATATTACTGATGGACCAGGCGAG
TAAGTATGCCGTTGAGCGTACGATAGAGTACGGTGAGCGCGTGGAGATTAACTCAATTCTTAATATCGTACACATGATGA
ATCCTGGGGCTGCATTCAGCTTGCTAGCTGATGCTGGTGGCTGGCAACGCTATTTCTTTATTGCATTAGCCTCTGGCGTA
TCGGTTTGGTTGGTTTGGACAATGCGGCGGCGTCCAACCCGGCTTGAAGCGGCGAGCTATTCGACATCAACGCGCAGTTA
CAACGAAATGCCGATGAATTAA

Upstream 100 bases:

>100_bases
ATTCGCAAAACCGGGAAAATCGGACCCAACATATCCGGTTGGGTATACGTCACCCCTGTCGAGCAAGCGCTACCGATTGG
AGGAAAAGAAAATTAACTTC

Downstream 100 bases:

>100_bases
AACGGGCCAATGCGGCGCTAAATAGCGACTTGAACGCAAAGATGGAAGATATCCAGAACCTGGAACACGAGTATGAAGAA
GCCGTGACAAGGTGCCGGGA

Product: lipoprotein signal peptidase-like protein

Products: NA

Alternate protein names: Prolipoprotein signal peptidase; Signal peptidase II; SPase II [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MANSNPTNTFCGWLCLSGLILLMDQASKYAVERTIEYGERVEINSILNIVHMMNPGAAFSLLADAGGWQRYFFIALASGV
SVWLVWTMRRRPTRLEAASYSTSTRSYNEMPMN

Sequences:

>Translated_113_residues
MANSNPTNTFCGWLCLSGLILLMDQASKYAVERTIEYGERVEINSILNIVHMMNPGAAFSLLADAGGWQRYFFIALASGV
SVWLVWTMRRRPTRLEAASYSTSTRSYNEMPMN
>Mature_112_residues
ANSNPTNTFCGWLCLSGLILLMDQASKYAVERTIEYGERVEINSILNIVHMMNPGAAFSLLADAGGWQRYFFIALASGVS
VWLVWTMRRRPTRLEAASYSTSTRSYNEMPMN

Specific function: This protein specifically catalyzes the removal of signal peptides from prolipoproteins [H]

COG id: COG0597

COG function: function code MU; Lipoprotein signal peptidase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A8 family [H]

Homologues:

Organism=Escherichia coli, GI1786210, Length=78, Percent_Identity=44.8717948717949, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001872 [H]

Pfam domain/function: PF01252 Peptidase_A8 [H]

EC number: =3.4.23.36 [H]

Molecular weight: Translated: 12735; Mature: 12604

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSNPTNTFCGWLCLSGLILLMDQASKYAVERTIEYGERVEINSILNIVHMMNPGAAFS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCEE
LLADAGGWQRYFFIALASGVSVWLVWTMRRRPTRLEAASYSTSTRSYNEMPMN
HHHCCCCCHHHHEEHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANSNPTNTFCGWLCLSGLILLMDQASKYAVERTIEYGERVEINSILNIVHMMNPGAAFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCEE
LLADAGGWQRYFFIALASGVSVWLVWTMRRRPTRLEAASYSTSTRSYNEMPMN
HHHCCCCCHHHHEEHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA