| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
Click here to switch to the map view.
The map label for this gene is 117621628
Identifier: 117621628
GI number: 117621628
Start: 42958
End: 43734
Strand: Reverse
Name: 117621628
Synonym: BAPKO_2057
Alternate gene names: NA
Gene position: 43734-42958 (Counterclockwise)
Preceding gene: 117621629
Following gene: 117621627
Centisome position: 72.94
GC content: 26.25
Gene sequence:
>777_bases ATGGGTAAAAAGGTAATTTTAATATTGTTAAAAACTCTAATATTGTCCTGTAATCTATTTACAAACAAAGAAGAAAAAAT TAAAGAAGAAAAAATTAAAGAAGAAAAACCTGCAGCAAAAATAATCTCGGTAGCATCGATTCAAAGAGTCGAAATAAGAG CATCAAATCAAAACCCAATAAGCATTAAAAATTACTATAAACAAGCTTATCCGATTCAAACATTCACTATTGATTTTAGC ATTAACAGAGAACATGAATTTCAACAAGCAGAGGATAAAATCTTATCTACACAAGGAAAAGTAGAATCTTTGAGCATCTT AATAAATAAAGAATTGTTAGACTCAAAACAAACTAAAGGATTTACTTTTAAAAAACTTAAAGAAATTCAAAATATTGAGA ATTTTTTCCAAAATCAAGATCTATTATTTGTTTTAAACCTTAAACCCGAAAATAATAACAATATTATTAACATTATGCTC AATCCCCCAAACGACTTCCATAAGCCCAAAGATTATGTTTTACTAGGACTTAAAGATATAATTAAAAAGGGTGTGGGTGA GCAGTACGCAAATCCTATCTATAGATTCCAAATAAAAAATAAAAAAGATTACCATTCAATAGATTACAATAAAGTGTCTA TTCGCGAAAACAGCATAGAATTAGACCTATTGCCTCACAATCAAATCTTTAAAATGAACAAAAATTTCAATAAAATCTTA GAAATATTAACAGATAAAAATAATCTAAAATCGGTCATTCAAAATGAATATATCTAA
Upstream 100 bases:
>100_bases ATTTTCAATATTTTTAATATTTTCAATCTAATAAAACTTAATATAAGTTATTAATTATTATGAATAATATATAATATATA TAAAGGGTAAGGAGCAATAA
Downstream 100 bases:
>100_bases TAATATTAAACTTTAAAATAACATCTATTTAATTGATAATTAAAATCATATGATATATAATTACATTTAAATTGCTTAGG TTAAAGGAATGATTAAATGG
Product: surface lipoprotein P27
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MGKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPISIKNYYKQAYPIQTFTIDFS INREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKGFTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIML NPPNDFHKPKDYVLLGLKDIIKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL EILTDKNNLKSVIQNEYI
Sequences:
>Translated_258_residues MGKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPISIKNYYKQAYPIQTFTIDFS INREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKGFTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIML NPPNDFHKPKDYVLLGLKDIIKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL EILTDKNNLKSVIQNEYI >Mature_257_residues GKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPISIKNYYKQAYPIQTFTIDFSI NREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKGFTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIMLN PPNDFHKPKDYVLLGLKDIIKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKILE ILTDKNNLKSVIQNEYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30215; Mature: 30084
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPI CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCE SIKNYYKQAYPIQTFTIDFSINREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKG EHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCC FTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIMLNPPNDFHKPKDYVLLGLKDI CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHEEECHHHH IKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL HHHCCCHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCHHHHH EILTDKNNLKSVIQNEYI HHHCCCHHHHHHHHHCCC >Mature Secondary Structure GKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPI CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCE SIKNYYKQAYPIQTFTIDFSINREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKG EHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCC FTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIMLNPPNDFHKPKDYVLLGLKDI CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHEEECHHHH IKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL HHHCCCHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCHHHHH EILTDKNNLKSVIQNEYI HHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA