Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621628

Identifier: 117621628

GI number: 117621628

Start: 42958

End: 43734

Strand: Reverse

Name: 117621628

Synonym: BAPKO_2057

Alternate gene names: NA

Gene position: 43734-42958 (Counterclockwise)

Preceding gene: 117621629

Following gene: 117621627

Centisome position: 72.94

GC content: 26.25

Gene sequence:

>777_bases
ATGGGTAAAAAGGTAATTTTAATATTGTTAAAAACTCTAATATTGTCCTGTAATCTATTTACAAACAAAGAAGAAAAAAT
TAAAGAAGAAAAAATTAAAGAAGAAAAACCTGCAGCAAAAATAATCTCGGTAGCATCGATTCAAAGAGTCGAAATAAGAG
CATCAAATCAAAACCCAATAAGCATTAAAAATTACTATAAACAAGCTTATCCGATTCAAACATTCACTATTGATTTTAGC
ATTAACAGAGAACATGAATTTCAACAAGCAGAGGATAAAATCTTATCTACACAAGGAAAAGTAGAATCTTTGAGCATCTT
AATAAATAAAGAATTGTTAGACTCAAAACAAACTAAAGGATTTACTTTTAAAAAACTTAAAGAAATTCAAAATATTGAGA
ATTTTTTCCAAAATCAAGATCTATTATTTGTTTTAAACCTTAAACCCGAAAATAATAACAATATTATTAACATTATGCTC
AATCCCCCAAACGACTTCCATAAGCCCAAAGATTATGTTTTACTAGGACTTAAAGATATAATTAAAAAGGGTGTGGGTGA
GCAGTACGCAAATCCTATCTATAGATTCCAAATAAAAAATAAAAAAGATTACCATTCAATAGATTACAATAAAGTGTCTA
TTCGCGAAAACAGCATAGAATTAGACCTATTGCCTCACAATCAAATCTTTAAAATGAACAAAAATTTCAATAAAATCTTA
GAAATATTAACAGATAAAAATAATCTAAAATCGGTCATTCAAAATGAATATATCTAA

Upstream 100 bases:

>100_bases
ATTTTCAATATTTTTAATATTTTCAATCTAATAAAACTTAATATAAGTTATTAATTATTATGAATAATATATAATATATA
TAAAGGGTAAGGAGCAATAA

Downstream 100 bases:

>100_bases
TAATATTAAACTTTAAAATAACATCTATTTAATTGATAATTAAAATCATATGATATATAATTACATTTAAATTGCTTAGG
TTAAAGGAATGATTAAATGG

Product: surface lipoprotein P27

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPISIKNYYKQAYPIQTFTIDFS
INREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKGFTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIML
NPPNDFHKPKDYVLLGLKDIIKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL
EILTDKNNLKSVIQNEYI

Sequences:

>Translated_258_residues
MGKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPISIKNYYKQAYPIQTFTIDFS
INREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKGFTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIML
NPPNDFHKPKDYVLLGLKDIIKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL
EILTDKNNLKSVIQNEYI
>Mature_257_residues
GKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPISIKNYYKQAYPIQTFTIDFSI
NREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKGFTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIMLN
PPNDFHKPKDYVLLGLKDIIKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKILE
ILTDKNNLKSVIQNEYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30215; Mature: 30084

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPI
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCE
SIKNYYKQAYPIQTFTIDFSINREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKG
EHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCC
FTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIMLNPPNDFHKPKDYVLLGLKDI
CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHEEECHHHH
IKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL
HHHCCCHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCHHHHH
EILTDKNNLKSVIQNEYI
HHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GKKVILILLKTLILSCNLFTNKEEKIKEEKIKEEKPAAKIISVASIQRVEIRASNQNPI
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCE
SIKNYYKQAYPIQTFTIDFSINREHEFQQAEDKILSTQGKVESLSILINKELLDSKQTKG
EHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCC
FTFKKLKEIQNIENFFQNQDLLFVLNLKPENNNNIINIMLNPPNDFHKPKDYVLLGLKDI
CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHEEECHHHH
IKKGVGEQYANPIYRFQIKNKKDYHSIDYNKVSIRENSIELDLLPHNQIFKMNKNFNKIL
HHHCCCHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCHHHHH
EILTDKNNLKSVIQNEYI
HHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA