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The map label for this gene is soj [H]

Identifier: 117621591

GI number: 117621591

Start: 16007

End: 16759

Strand: Direct

Name: soj [H]

Synonym: BAPKO_2020

Alternate gene names: 117621591

Gene position: 16007-16759 (Clockwise)

Preceding gene: 117621590

Following gene: 117621592

Centisome position: 26.7

GC content: 26.56

Gene sequence:

>753_bases
ATGGATAAAAAAGAGACAAAAGTAATAACAGTTGCAAGCATAAAAGGTGGTGTTGGCAAAAGTACAACAAGTTTAATTTT
TGCCACATTGCTTTCAATCAAATGTAAAGTTCTTTTAATAGATATTGATACTCAAGCTTCAACAACAAGCTATTTTTTTA
ATAAAATCAAAGATAACAATGTAGATTTAATAAACAAAAACATATACGAAGTGTTAATATCAAATTTGCATATAGATAAT
GCAATAATAACAATTAACAAAAATTTGGATTTAATTCCAAGTTATTTAACATTGCATAAATTCAATTCAGAATCTATTCC
GTACAAAGAATTTAAATTAAAAGAACAACTAAAGCTACTTAGCAATCATTATGATTACATAATACTTGATACAAATCCCA
GCTTGGATTTTACTTTAACGAATGCTCTTGTATGCAGCAATTATATAATAATACCAATAACGGCAGAGAAATGGGCTGTT
GAAAGTTTAGACTTGTTTACTTTTTTTATGAACAAGCTATTATTAACTTTGCCAATGTATTTAATCAATACCAAATTTAA
AAAAAACAACACACATAAAGAACTTTTAAAGGTTTTAGAGAAAAATAATAATTTCTTAGGGACAATATCTGAGAGAGAAG
ATTTAAATAAAAGAATAGCAAAAAACGACAGATTTGATTTGACGAAGGATTACATAATAGAGTACCAAAACACGCTTGAC
GCGTTTTTAAATAAATCAGGTTACGTACACTAA

Upstream 100 bases:

>100_bases
GCCCCTATTATAATACGCTTTTAAATATTATTTTAGAGTTAGAAACCGAACTTTACGCTTTTTATAACAAAAAATTATCA
AAAGGGGGAATTATTCCTGA

Downstream 100 bases:

>100_bases
GTGTACTCGATTGTAAAGGAGGAGCACAGGTGGATATAAAGATAAATAAAAGGAATTTATCTGAGAGTGTTAGAGAAGAA
GAACAAGCGCTTATTCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDKKETKVITVASIKGGVGKSTTSLIFATLLSIKCKVLLIDIDTQASTTSYFFNKIKDNNVDLINKNIYEVLISNLHIDN
AIITINKNLDLIPSYLTLHKFNSESIPYKEFKLKEQLKLLSNHYDYIILDTNPSLDFTLTNALVCSNYIIIPITAEKWAV
ESLDLFTFFMNKLLLTLPMYLINTKFKKNNTHKELLKVLEKNNNFLGTISEREDLNKRIAKNDRFDLTKDYIIEYQNTLD
AFLNKSGYVH

Sequences:

>Translated_250_residues
MDKKETKVITVASIKGGVGKSTTSLIFATLLSIKCKVLLIDIDTQASTTSYFFNKIKDNNVDLINKNIYEVLISNLHIDN
AIITINKNLDLIPSYLTLHKFNSESIPYKEFKLKEQLKLLSNHYDYIILDTNPSLDFTLTNALVCSNYIIIPITAEKWAV
ESLDLFTFFMNKLLLTLPMYLINTKFKKNNTHKELLKVLEKNNNFLGTISEREDLNKRIAKNDRFDLTKDYIIEYQNTLD
AFLNKSGYVH
>Mature_250_residues
MDKKETKVITVASIKGGVGKSTTSLIFATLLSIKCKVLLIDIDTQASTTSYFFNKIKDNNVDLINKNIYEVLISNLHIDN
AIITINKNLDLIPSYLTLHKFNSESIPYKEFKLKEQLKLLSNHYDYIILDTNPSLDFTLTNALVCSNYIIIPITAEKWAV
ESLDLFTFFMNKLLLTLPMYLINTKFKKNNTHKELLKVLEKNNNFLGTISEREDLNKRIAKNDRFDLTKDYIIEYQNTLD
AFLNKSGYVH

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28818; Mature: 28818

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKETKVITVASIKGGVGKSTTSLIFATLLSIKCKVLLIDIDTQASTTSYFFNKIKDNN
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCHHHHHHHHHCCCC
VDLINKNIYEVLISNLHIDNAIITINKNLDLIPSYLTLHKFNSESIPYKEFKLKEQLKLL
CEEEHHHHHHHHHHHCEECCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
SNHYDYIILDTNPSLDFTLTNALVCSNYIIIPITAEKWAVESLDLFTFFMNKLLLTLPMY
HCCCCEEEEECCCCCCEEEHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LINTKFKKNNTHKELLKVLEKNNNFLGTISEREDLNKRIAKNDRFDLTKDYIIEYQNTLD
HHCCCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AFLNKSGYVH
HHHCCCCCCC
>Mature Secondary Structure
MDKKETKVITVASIKGGVGKSTTSLIFATLLSIKCKVLLIDIDTQASTTSYFFNKIKDNN
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCHHHHHHHHHCCCC
VDLINKNIYEVLISNLHIDNAIITINKNLDLIPSYLTLHKFNSESIPYKEFKLKEQLKLL
CEEEHHHHHHHHHHHCEECCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
SNHYDYIILDTNPSLDFTLTNALVCSNYIIIPITAEKWAVESLDLFTFFMNKLLLTLPMY
HCCCCEEEEECCCCCCEEEHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LINTKFKKNNTHKELLKVLEKNNNFLGTISEREDLNKRIAKNDRFDLTKDYIIEYQNTLD
HHCCCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AFLNKSGYVH
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]