Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621579

Identifier: 117621579

GI number: 117621579

Start: 7147

End: 7617

Strand: Reverse

Name: 117621579

Synonym: BAPKO_2008

Alternate gene names: NA

Gene position: 7617-7147 (Counterclockwise)

Preceding gene: 117621595

Following gene: 117621578

Centisome position: 12.7

GC content: 28.24

Gene sequence:

>471_bases
ATGAAAAATATTTTATTATTTGTTATTTTATTATTCTTTTCTTGTAAAGAATTTAATTATTCTGATATTAGGAGAAGATC
TTCAAAGGTTTTAAATTCTTCTAGCGCATTAAATGGAGAGGTTGAAATGTCTTTTGTAAACTCTTTGAATGATGACCAAA
AAGAAGCTTTGTTTTTTCTTGAGCAAGTGGTTCTTGATAGTAATCCTGATAAGTTTAATCAAATTTTTAATTTGAATGAA
GACAAAGTAAAAGAAATGCTTGCTACTGTTGTTAAGTGTTTGCAAGCTAAAAGAAATGCCAAAATAAAGCTTGAGCGTTC
AAATGATGCAAATGTTGCTAATGCTAAACAGCAGTTGTTACAGGTTGAAAAAACCTACATAAATAATTTGCGACAATCTT
TTATAACTACTAAGAGCATTGAAGAAGCTTGTAATCTTGTGAAAAATTATGATGCATCTGCTTCGTTTTAA

Upstream 100 bases:

>100_bases
TTTTAAATGTTGAGATATATTATAATTTATATTTTTTTTAAAAAATGTTTATTTAATTTTTTAATTTAAATATTTGTGTA
ATCACGGTGTGGGAGACTGT

Downstream 100 bases:

>100_bases
CTTTTTTATGCTGATTAATTGTTTGATTAACTCTCCCTTGGAGAGTTAATTTTTCCCCATATGTTTATTTTTGCTTATTA
CGTTGTAAATATATCTGAAT

Product: chpAI protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKNILLFVILLFFSCKEFNYSDIRRRSSKVLNSSSALNGEVEMSFVNSLNDDQKEALFFLEQVVLDSNPDKFNQIFNLNE
DKVKEMLATVVKCLQAKRNAKIKLERSNDANVANAKQQLLQVEKTYINNLRQSFITTKSIEEACNLVKNYDASASF

Sequences:

>Translated_156_residues
MKNILLFVILLFFSCKEFNYSDIRRRSSKVLNSSSALNGEVEMSFVNSLNDDQKEALFFLEQVVLDSNPDKFNQIFNLNE
DKVKEMLATVVKCLQAKRNAKIKLERSNDANVANAKQQLLQVEKTYINNLRQSFITTKSIEEACNLVKNYDASASF
>Mature_156_residues
MKNILLFVILLFFSCKEFNYSDIRRRSSKVLNSSSALNGEVEMSFVNSLNDDQKEALFFLEQVVLDSNPDKFNQIFNLNE
DKVKEMLATVVKCLQAKRNAKIKLERSNDANVANAKQQLLQVEKTYINNLRQSFITTKSIEEACNLVKNYDASASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17888; Mature: 17888

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILLFVILLFFSCKEFNYSDIRRRSSKVLNSSSALNGEVEMSFVNSLNDDQKEALFFL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHH
EQVVLDSNPDKFNQIFNLNEDKVKEMLATVVKCLQAKRNAKIKLERSNDANVANAKQQLL
HHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
QVEKTYINNLRQSFITTKSIEEACNLVKNYDASASF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKNILLFVILLFFSCKEFNYSDIRRRSSKVLNSSSALNGEVEMSFVNSLNDDQKEALFFL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHH
EQVVLDSNPDKFNQIFNLNEDKVKEMLATVVKCLQAKRNAKIKLERSNDANVANAKQQLL
HHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
QVEKTYINNLRQSFITTKSIEEACNLVKNYDASASF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA