Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621576

Identifier: 117621576

GI number: 117621576

Start: 4545

End: 5387

Strand: Reverse

Name: 117621576

Synonym: BAPKO_2005

Alternate gene names: NA

Gene position: 5387-4545 (Counterclockwise)

Preceding gene: 117621577

Following gene: 117621571

Centisome position: 8.98

GC content: 31.2

Gene sequence:

>843_bases
TTGAAAATAGTCATTATATTCGTCGTGGTTTTAATTCTTGGTTGTTCTTTAGATAATAATTCAAAAATGGAGAATGAGGG
TGGCGGTTTTAAAGAAAATGGATCAGATAGACCAGGTCAAGAAAAAAGGGCTTTAGGTTCATCGAATTTTAGGTCATTGT
TAGATGATTCTGGGGTGGGATCCAATTTTCAAAATTATGAGCCTTTAAAAGCGCTTGAGAATAAAAATAAATTTATTAAT
TACAACCAAATAGAGTTTTTAGAAGGAACAAAATCAGTCAATTTGTATCTTTGGTCGACTTATATTCGCTGGGTGAAAAT
TAAAGCCAGAGATTTGTGTGATGAGCGTGGAAATTGTATTAAAGAGCTTAATGGCATTAAGTATTCTTATCTTGTTTCTC
CTATTGATGGAAGCTACATTTCTTATGCTATGCCTTTAATAATTTTTGAAACTACTAGTGAAAGTGATCCTTTTTATTCT
GTTTCTGGATTTAAATTAATAAACAAAGGAAGCGATATAAATTTTAATGACAATAAGGGGGGATTTTTAGGGGGAATCCC
AATGTCTGAAAAATCAGTTGAATCTGGGCTTGTAACTGCGTATCCTTTTGGTTCTAGTGATTCTAAAAGAGTGGTTGAGG
CTTTTACTGCCCTTTATAATAATGGAATTTGGAACGATATGATTGCCGAGATTACCATTAAGTCTAAGAACCCTCCACAA
AATGAAAAAGTTTACAGAATTTCACTTGATTCTAAGCTTTTTAATGTTACTATGAAAAAAATAATTGAAAAATATCCTAA
TATAAAAAATACAAGCTTAACATTTAATTCGTTGATTAACTAG

Upstream 100 bases:

>100_bases
ATTTTTGATTTTGCTTTTTTTGTTAATTGCTCTACATTTGCTTCTAATAATATAATTTAAGAATTTTAAATATTATAAAA
AAGTTTTAAGGGGGAGCGTT

Downstream 100 bases:

>100_bases
AAAGTTGTTTTAAGAGCTAGCAGTTTTAACTGCTAGCTTTTTTTAAAGTAATTTCAAATTTTAGGCTTAGTTTAGCATTA
TACAGCGTCTTTAAGATTAT

Product: antigen, S2

Products: NA

Alternate protein names: Lipoprotein; P23-Like Cell Envelope Protein; S2 Lipoprotein

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKIVIIFVVVLILGCSLDNNSKMENEGGGFKENGSDRPGQEKRALGSSNFRSLLDDSGVGSNFQNYEPLKALENKNKFIN
YNQIEFLEGTKSVNLYLWSTYIRWVKIKARDLCDERGNCIKELNGIKYSYLVSPIDGSYISYAMPLIIFETTSESDPFYS
VSGFKLINKGSDINFNDNKGGFLGGIPMSEKSVESGLVTAYPFGSSDSKRVVEAFTALYNNGIWNDMIAEITIKSKNPPQ
NEKVYRISLDSKLFNVTMKKIIEKYPNIKNTSLTFNSLIN

Sequences:

>Translated_280_residues
MKIVIIFVVVLILGCSLDNNSKMENEGGGFKENGSDRPGQEKRALGSSNFRSLLDDSGVGSNFQNYEPLKALENKNKFIN
YNQIEFLEGTKSVNLYLWSTYIRWVKIKARDLCDERGNCIKELNGIKYSYLVSPIDGSYISYAMPLIIFETTSESDPFYS
VSGFKLINKGSDINFNDNKGGFLGGIPMSEKSVESGLVTAYPFGSSDSKRVVEAFTALYNNGIWNDMIAEITIKSKNPPQ
NEKVYRISLDSKLFNVTMKKIIEKYPNIKNTSLTFNSLIN
>Mature_280_residues
MKIVIIFVVVLILGCSLDNNSKMENEGGGFKENGSDRPGQEKRALGSSNFRSLLDDSGVGSNFQNYEPLKALENKNKFIN
YNQIEFLEGTKSVNLYLWSTYIRWVKIKARDLCDERGNCIKELNGIKYSYLVSPIDGSYISYAMPLIIFETTSESDPFYS
VSGFKLINKGSDINFNDNKGGFLGGIPMSEKSVESGLVTAYPFGSSDSKRVVEAFTALYNNGIWNDMIAEITIKSKNPPQ
NEKVYRISLDSKLFNVTMKKIIEKYPNIKNTSLTFNSLIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31434; Mature: 31434

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVIIFVVVLILGCSLDNNSKMENEGGGFKENGSDRPGQEKRALGSSNFRSLLDDSGVG
CEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCC
SNFQNYEPLKALENKNKFINYNQIEFLEGTKSVNLYLWSTYIRWVKIKARDLCDERGNCI
CCCCCCCHHHHHHCCCCEECCCEEEEECCCCEEEEEEEEEEEEEEEEHHHHHHHHHCHHH
KELNGIKYSYLVSPIDGSYISYAMPLIIFETTSESDPFYSVSGFKLINKGSDINFNDNKG
HHHCCCEEEEEECCCCCCHHHEEEEEEEEEECCCCCCEEEECCEEEEECCCCCCCCCCCC
GFLGGIPMSEKSVESGLVTAYPFGSSDSKRVVEAFTALYNNGIWNDMIAEITIKSKNPPQ
CEEECCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC
NEKVYRISLDSKLFNVTMKKIIEKYPNIKNTSLTFNSLIN
CCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEHHHHCC
>Mature Secondary Structure
MKIVIIFVVVLILGCSLDNNSKMENEGGGFKENGSDRPGQEKRALGSSNFRSLLDDSGVG
CEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCC
SNFQNYEPLKALENKNKFINYNQIEFLEGTKSVNLYLWSTYIRWVKIKARDLCDERGNCI
CCCCCCCHHHHHHCCCCEECCCEEEEECCCCEEEEEEEEEEEEEEEEHHHHHHHHHCHHH
KELNGIKYSYLVSPIDGSYISYAMPLIIFETTSESDPFYSVSGFKLINKGSDINFNDNKG
HHHCCCEEEEEECCCCCCHHHEEEEEEEEEECCCCCCEEEECCEEEEECCCCCCCCCCCC
GFLGGIPMSEKSVESGLVTAYPFGSSDSKRVVEAFTALYNNGIWNDMIAEITIKSKNPPQ
CEEECCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC
NEKVYRISLDSKLFNVTMKKIIEKYPNIKNTSLTFNSLIN
CCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA