| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116874005
Identifier: 116874005
GI number: 116874005
Start: 2618814
End: 2619248
Strand: Direct
Name: 116874005
Synonym: lwe2589
Alternate gene names: NA
Gene position: 2618814-2619248 (Clockwise)
Preceding gene: 116874004
Following gene: 116874006
Centisome position: 93.06
GC content: 38.62
Gene sequence:
>435_bases GTGAGAAAGTACTTTTATATGGTGAAGCGCTGGGATATTATTATTATTTTATCTCTTTGTCTACTTTCATTTTTGCCGAT TGCTATTTTTTCCTATGTAAAAGCGAATGAACCTGCTCCGGCTAGCGGAAAAAAAGAGCTTGTTGCGGTTATTTCTGTTG ATAATAAAGAATATAAAACTGTGACACTTACTGGACATAAAGGAACGGAAAGCTTTGATGTGAAACAACCAGACGGACAT ACGAACACGATTGAGGTTTCTGGAGAAGAAATCCGAATCAGTAAAGCTAACTGTAACGATCAGGTGTGTGTTCGAACTGG AGCAATTGACAAACAAGGTGATACAGTCGTTTGCCTTCCACATAAATTAGTAATTGAAGTAAAAGCGAGTGACGGGAGTT CAGGCGATGCAGATGATCCAATTATCTCTTCCTGA
Upstream 100 bases:
>100_bases TTTTATTATTTGTTTATTTTTATGAACTTTTTCCTATTATATTTAGGCGTTATCCTTTAAAATAGGATTTGTACATGAGA TTTTGAAAGGAGGCAATGCG
Downstream 100 bases:
>100_bases CCTTATCTCTAATAGATAGGAAAGTGTTTCTATGACAAAAAATAGACGATTAGTATATATAGCGCTTCTGGCTGCACAAG CTGTTGTCATTAGTTTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRKYFYMVKRWDIIIILSLCLLSFLPIAIFSYVKANEPAPASGKKELVAVISVDNKEYKTVTLTGHKGTESFDVKQPDGH TNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDADDPIISS
Sequences:
>Translated_144_residues MRKYFYMVKRWDIIIILSLCLLSFLPIAIFSYVKANEPAPASGKKELVAVISVDNKEYKTVTLTGHKGTESFDVKQPDGH TNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDADDPIISS >Mature_144_residues MRKYFYMVKRWDIIIILSLCLLSFLPIAIFSYVKANEPAPASGKKELVAVISVDNKEYKTVTLTGHKGTESFDVKQPDGH TNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDADDPIISS
Specific function: Unknown
COG id: COG5341
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15744; Mature: 15744
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYFYMVKRWDIIIILSLCLLSFLPIAIFSYVKANEPAPASGKKELVAVISVDNKEYKT CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEE VTLTGHKGTESFDVKQPDGHTNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLP EEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEC HKLVIEVKASDGSSGDADDPIISS CEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRKYFYMVKRWDIIIILSLCLLSFLPIAIFSYVKANEPAPASGKKELVAVISVDNKEYKT CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEE VTLTGHKGTESFDVKQPDGHTNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLP EEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEC HKLVIEVKASDGSSGDADDPIISS CEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA