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The map label for this gene is 116873882

Identifier: 116873882

GI number: 116873882

Start: 2506603

End: 2507661

Strand: Direct

Name: 116873882

Synonym: lwe2466

Alternate gene names: NA

Gene position: 2506603-2507661 (Clockwise)

Preceding gene: 116873881

Following gene: 116873901

Centisome position: 89.07

GC content: 35.13

Gene sequence:

>1059_bases
ATGAGTAAAGGCAATGATGATAGCCGAAGAAGCAGCAAGAAGTACAAACGCAGAAGGAAGATTTTATTTTGGATTTTAAT
TCCGATAATGTGTTTAGTCCTAGCTGGTGTTGGATACGGCACTTATCTTTTTAGTAAAACCAAACTTGCAGCAGATAATT
CTTTTGATAATGTTAGGAACGGTCAGGCTTCCACTTTACGATCAAAAGATATTGAACCTATAAAAGATAGTTTTTCTATT
TTAATTATTGGCGTTGATACAAGTACAAAACGTGAGTCAAACGGCAATCCCCGAAGCGATTCACTTATCTTAGCTACATT
TAATGTCAAAGACTCCCGTGTAGAAATGACAAGTATTCCTCGTGACTCTTACGTTCATATTGAAGATTCAGCAAAAGATA
TTGATAAATACACCAAAATCAATGCCGCTCATGCTTATGGTGGTCCAGAACTTACGATGAAAACGGTAGAAGAAGAATTC
CAGATTCCGATTGATTACTATGTTCGTTTTGATTTTGACGCATTTCTTAAAATCATTGACGCTTTAGACGGAATTGATGT
GGATGTTCCAGTTAGCTTCACGGAGCAAGACTCTAACGACAAAGCAGGAGCTATTTCCCTTGAAAAAGGACAACAACATC
TTAACGGCGAACAAGCTTTAGCCCTAGCTCGTACAAGACATATTGATAGTGACATTGAACGTGGTAAAAGACAACAGCTA
ATTATTAAAGCAATCGTAAATGAAGCCACTTCTATTTCATCTATTAGTAAATATTCCGATATTATTAAAGTAGTTGGAGA
TAACATGAAAACCAATTTAACATTCAATCAAATGCTTTCCATTGCAAAATTTGGGATGTCTAATTCAATTGATATTAAAT
CATTAGAACTTAAAGGTGACGATAACCCAATGAATGGTGTTTATTATTATCAACTAAACGAAGACTCTGTTCATAGCATA
TCTAATCAATTCGCTGATGAACTTGGGATTAAAAAACCGTTCCCAAACGCAACTCCGTATTCAGATGATAGTTCAAGTAC
AACAAATTCTTCTAACTAA

Upstream 100 bases:

>100_bases
AGTTTAAAAATTAAAGAAACCGTAAATTGGGCGTAACATTCTTTAATGCCGTAAATGATACAATGAAACTTAGAAAAGTG
ACTATAAGGAGAATTAATAT

Downstream 100 bases:

>100_bases
AAAAACTCCCAACAACTTGTTAATAGTTGTTGGGAGTTTTTTCAGTTTCGTTTTCGATGTATTTTTTGAAGTAAGTTAAG
AATTGGTCGATAATCTTCAC

Product: transcriptional regulator; putative

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSKGNDDSRRSSKKYKRRRKILFWILIPIMCLVLAGVGYGTYLFSKTKLAADNSFDNVRNGQASTLRSKDIEPIKDSFSI
LIIGVDTSTKRESNGNPRSDSLILATFNVKDSRVEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEF
QIPIDYYVRFDFDAFLKIIDALDGIDVDVPVSFTEQDSNDKAGAISLEKGQQHLNGEQALALARTRHIDSDIERGKRQQL
IIKAIVNEATSISSISKYSDIIKVVGDNMKTNLTFNQMLSIAKFGMSNSIDIKSLELKGDDNPMNGVYYYQLNEDSVHSI
SNQFADELGIKKPFPNATPYSDDSSSTTNSSN

Sequences:

>Translated_352_residues
MSKGNDDSRRSSKKYKRRRKILFWILIPIMCLVLAGVGYGTYLFSKTKLAADNSFDNVRNGQASTLRSKDIEPIKDSFSI
LIIGVDTSTKRESNGNPRSDSLILATFNVKDSRVEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEF
QIPIDYYVRFDFDAFLKIIDALDGIDVDVPVSFTEQDSNDKAGAISLEKGQQHLNGEQALALARTRHIDSDIERGKRQQL
IIKAIVNEATSISSISKYSDIIKVVGDNMKTNLTFNQMLSIAKFGMSNSIDIKSLELKGDDNPMNGVYYYQLNEDSVHSI
SNQFADELGIKKPFPNATPYSDDSSSTTNSSN
>Mature_351_residues
SKGNDDSRRSSKKYKRRRKILFWILIPIMCLVLAGVGYGTYLFSKTKLAADNSFDNVRNGQASTLRSKDIEPIKDSFSIL
IIGVDTSTKRESNGNPRSDSLILATFNVKDSRVEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEFQ
IPIDYYVRFDFDAFLKIIDALDGIDVDVPVSFTEQDSNDKAGAISLEKGQQHLNGEQALALARTRHIDSDIERGKRQQLI
IKAIVNEATSISSISKYSDIIKVVGDNMKTNLTFNQMLSIAKFGMSNSIDIKSLELKGDDNPMNGVYYYQLNEDSVHSIS
NQFADELGIKKPFPNATPYSDDSSSTTNSSN

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 39293; Mature: 39161

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGNDDSRRSSKKYKRRRKILFWILIPIMCLVLAGVGYGTYLFSKTKLAADNSFDNVRN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCEECCCCCCHHHCC
GQASTLRSKDIEPIKDSFSILIIGVDTSTKRESNGNPRSDSLILATFNVKDSRVEMTSIP
CCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCC
RDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEFQIPIDYYVRFDFDAFLKIID
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHH
ALDGIDVDVPVSFTEQDSNDKAGAISLEKGQQHLNGEQALALARTRHIDSDIERGKRQQL
HHCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHCCHHHHHCHHHHH
IIKAIVNEATSISSISKYSDIIKVVGDNMKTNLTFNQMLSIAKFGMSNSIDIKSLELKGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
DNPMNGVYYYQLNEDSVHSISNQFADELGIKKPFPNATPYSDDSSSTTNSSN
CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKGNDDSRRSSKKYKRRRKILFWILIPIMCLVLAGVGYGTYLFSKTKLAADNSFDNVRN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCEECCCCCCHHHCC
GQASTLRSKDIEPIKDSFSILIIGVDTSTKRESNGNPRSDSLILATFNVKDSRVEMTSIP
CCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCC
RDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEFQIPIDYYVRFDFDAFLKIID
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHH
ALDGIDVDVPVSFTEQDSNDKAGAISLEKGQQHLNGEQALALARTRHIDSDIERGKRQQL
HHCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHCCHHHHHCHHHHH
IIKAIVNEATSISSISKYSDIIKVVGDNMKTNLTFNQMLSIAKFGMSNSIDIKSLELKGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
DNPMNGVYYYQLNEDSVHSISNQFADELGIKKPFPNATPYSDDSSSTTNSSN
CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]