| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is estA [H]
Identifier: 116873796
GI number: 116873796
Start: 2418799
End: 2419557
Strand: Direct
Name: estA [H]
Synonym: lwe2380
Alternate gene names: 116873796
Gene position: 2418799-2419557 (Clockwise)
Preceding gene: 116873795
Following gene: 116873798
Centisome position: 85.95
GC content: 36.36
Gene sequence:
>759_bases TTGGCTATTTTAGAACTAAATTTTAAATCAGAATGTTTAGCTATGCAAACAAGTGTAACGGTGATTTTACCCGAAACAGA AACACTTTATCATGGCCCTATTCCTAAATATAAAACACTATATATTCTTCACGGCTTATCCAATAATCACACTACTTATG TTCGTAATACAAATATTGAACGATATGCCACTGAAAAAGGACTCGCTGTCATCATGCCTGCAGCAGACCATAGTTTCTAT TCTAACATGGTTCACGGCCGCGACTATTTCCAGTTTGTTAGCACAGAACTTCCACATGTAATGAAAAATTGGTTCCCACT TTCAAGTAAAAAAGAAGATACTTTCATCGCTGGTCATTCTATGGGAGGTTATGGTGCGTTCAAAGTTGCACTTACTTTTC CCGAAAAATTCCAAGCAGCTGCAAGTATGTCTGGCGTTATGGATATCAATTATATCATTAAAGAAGATTGCTTCGAAAAT TTCAGCACACGTGCCATCACTGGAGAAATGACTAGCCAAACTGGTACAGAAAATGATTTATTTCATTTACTAGAAACCAA CCTAAAAAATCAAGTCGAATTACCAACTCTTTTCCAAAATTGTGGTACAGAAGACTTTCTTTATGAAGACAATATTCGAT TCCGCGATTTTGCTCTTGCTAAAAATGCTCCGCTAGAATATCGTGAAAGTCCCGGTGATCACGATTGGGATTTTTGGGAC AAAAGTATAAAAGAAATTATTGACTGGCTTCCACTTTAA
Upstream 100 bases:
>100_bases CGTTTAATTCCGAGTTAACTCATAAGATAAGTTATATTTATTTTATTTCGCCCAAAAATCATGTATACTAGAAAAAAAGA CACGTCAGGAGGCCCTTACA
Downstream 100 bases:
>100_bases TAGAAAGAAGACTTGGACATACCACCCAAGTCTTCTTTTTTTAATGCGTAAAACCGTAAGAATCATTTCGTCCTTTGTCA TGATAAAGAACTCTAGCATG
Product: tributyrin esterase
Products: NA
Alternate protein names: Acetylxylosidase [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MAILELNFKSECLAMQTSVTVILPETETLYHGPIPKYKTLYILHGLSNNHTTYVRNTNIERYATEKGLAVIMPAADHSFY SNMVHGRDYFQFVSTELPHVMKNWFPLSSKKEDTFIAGHSMGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFEN FSTRAITGEMTSQTGTENDLFHLLETNLKNQVELPTLFQNCGTEDFLYEDNIRFRDFALAKNAPLEYRESPGDHDWDFWD KSIKEIIDWLPL
Sequences:
>Translated_252_residues MAILELNFKSECLAMQTSVTVILPETETLYHGPIPKYKTLYILHGLSNNHTTYVRNTNIERYATEKGLAVIMPAADHSFY SNMVHGRDYFQFVSTELPHVMKNWFPLSSKKEDTFIAGHSMGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFEN FSTRAITGEMTSQTGTENDLFHLLETNLKNQVELPTLFQNCGTEDFLYEDNIRFRDFALAKNAPLEYRESPGDHDWDFWD KSIKEIIDWLPL >Mature_251_residues AILELNFKSECLAMQTSVTVILPETETLYHGPIPKYKTLYILHGLSNNHTTYVRNTNIERYATEKGLAVIMPAADHSFYS NMVHGRDYFQFVSTELPHVMKNWFPLSSKKEDTFIAGHSMGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFENF STRAITGEMTSQTGTENDLFHLLETNLKNQVELPTLFQNCGTEDFLYEDNIRFRDFALAKNAPLEYRESPGDHDWDFWDK SIKEIIDWLPL
Specific function: Unknown
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: NA
Molecular weight: Translated: 28913; Mature: 28782
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILELNFKSECLAMQTSVTVILPETETLYHGPIPKYKTLYILHGLSNNHTTYVRNTNIE CEEEEECCCCHHEEEEEEEEEEECCCCEEECCCCCCCEEEEEEECCCCCCEEEEECCCCH RYATEKGLAVIMPAADHSFYSNMVHGRDYFQFVSTELPHVMKNWFPLSSKKEDTFIAGHS HHHCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC MGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFENFSTRAITGEMTSQTGTENDL CCCCEEEEEEEECCHHHHHHHHHCCCEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHH FHLLETNLKNQVELPTLFQNCGTEDFLYEDNIRFRDFALAKNAPLEYRESPGDHDWDFWD HHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH KSIKEIIDWLPL HHHHHHHHHCCC >Mature Secondary Structure AILELNFKSECLAMQTSVTVILPETETLYHGPIPKYKTLYILHGLSNNHTTYVRNTNIE EEEEECCCCHHEEEEEEEEEEECCCCEEECCCCCCCEEEEEEECCCCCCEEEEECCCCH RYATEKGLAVIMPAADHSFYSNMVHGRDYFQFVSTELPHVMKNWFPLSSKKEDTFIAGHS HHHCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC MGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFENFSTRAITGEMTSQTGTENDL CCCCEEEEEEEECCHHHHHHHHHCCCEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHH FHLLETNLKNQVELPTLFQNCGTEDFLYEDNIRFRDFALAKNAPLEYRESPGDHDWDFWD HHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH KSIKEIIDWLPL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2111111 [H]