| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873730
Identifier: 116873730
GI number: 116873730
Start: 2354564
End: 2355169
Strand: Direct
Name: 116873730
Synonym: lwe2314
Alternate gene names: NA
Gene position: 2354564-2355169 (Clockwise)
Preceding gene: 116873729
Following gene: 116873735
Centisome position: 83.67
GC content: 29.54
Gene sequence:
>606_bases TTGAATATAGAAATGCTTGATTTCAAACAAATAAATGTCGATTCTAGTTTCATTAGTTTAAATGGTGAAGTTGTTTCGAG GGTAGTAAAATCAAATAAAATAATGGAATTTGATGAAAATACTTATGCGAAATTAGTCGATTGCTCTTTTCACAACGGAA TAATTGAAGTGAAAATGTTAAGTAGATTATTGCCAGATGCTCCTGATTTTGCTCGTGGTTTTATTGGAATTGCATTCAGA ATTAATGAAGATGATTCTATGTTTGAATCTTTTTATGTACGACCCACAAATGGCCGAGTTGACGATAAAATAAGAAAAAA TCGAGCAATTCAATATTTTTCTTATCCCAAATATACATTCGATTATTTCAGAAAAAATGGAATTCTTGATTTCGAAGGTA CTGCAGATATTGGACTTGACGAATGGATAATTTTAAAAATCATAATTAATGGTTCAGAAGGGGAATTTTATCTTAATAAT GAAGAAAAACCAGTTTTAGTTGTTAAAAACATGAAACATGGGGATTCTAGAGGTGCCATTGGTTTATTCGTAGATATAGG AACAGAAGGATTTTTTAAAGATTTAGACATTACTTTATGTGATTGA
Upstream 100 bases:
>100_bases CAAAAAACATCTTACTATATAGTTACTTTTTTGTGCCTACTTCTCATCTTAAAATATATCAGTTATCCTTTAGATATAAA TGATTGGGGAGTGTGATTAT
Downstream 100 bases:
>100_bases TTTTATAACGCTAAAAATATATCTGATATAACAAATTATTATAGCTCGCTGCTACATTTGAAAAATCATATCAAATTCTA ATTTAAAAATGCTTTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNIEMLDFKQINVDSSFISLNGEVVSRVVKSNKIMEFDENTYAKLVDCSFHNGIIEVKMLSRLLPDAPDFARGFIGIAFR INEDDSMFESFYVRPTNGRVDDKIRKNRAIQYFSYPKYTFDYFRKNGILDFEGTADIGLDEWIILKIIINGSEGEFYLNN EEKPVLVVKNMKHGDSRGAIGLFVDIGTEGFFKDLDITLCD
Sequences:
>Translated_201_residues MNIEMLDFKQINVDSSFISLNGEVVSRVVKSNKIMEFDENTYAKLVDCSFHNGIIEVKMLSRLLPDAPDFARGFIGIAFR INEDDSMFESFYVRPTNGRVDDKIRKNRAIQYFSYPKYTFDYFRKNGILDFEGTADIGLDEWIILKIIINGSEGEFYLNN EEKPVLVVKNMKHGDSRGAIGLFVDIGTEGFFKDLDITLCD >Mature_201_residues MNIEMLDFKQINVDSSFISLNGEVVSRVVKSNKIMEFDENTYAKLVDCSFHNGIIEVKMLSRLLPDAPDFARGFIGIAFR INEDDSMFESFYVRPTNGRVDDKIRKNRAIQYFSYPKYTFDYFRKNGILDFEGTADIGLDEWIILKIIINGSEGEFYLNN EEKPVLVVKNMKHGDSRGAIGLFVDIGTEGFFKDLDITLCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23061; Mature: 23061
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEMLDFKQINVDSSFISLNGEVVSRVVKSNKIMEFDENTYAKLVDCSFHNGIIEVKML CCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCEEEEHHH SRLLPDAPDFARGFIGIAFRINEDDSMFESFYVRPTNGRVDDKIRKNRAIQYFSYPKYTF HHHCCCCCCHHCCEEEEEEEECCCCCHHHEEEEECCCCCCCHHHHHCCCEEEEECCCHHH DYFRKNGILDFEGTADIGLDEWIILKIIINGSEGEFYLNNEEKPVLVVKNMKHGDSRGAI HHHHCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCCCEE GLFVDIGTEGFFKDLDITLCD EEEEEECCCCCEECCEEEECC >Mature Secondary Structure MNIEMLDFKQINVDSSFISLNGEVVSRVVKSNKIMEFDENTYAKLVDCSFHNGIIEVKML CCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCEEEEHHH SRLLPDAPDFARGFIGIAFRINEDDSMFESFYVRPTNGRVDDKIRKNRAIQYFSYPKYTF HHHCCCCCCHHCCEEEEEEEECCCCCHHHEEEEECCCCCCCHHHHHCCCEEEEECCCHHH DYFRKNGILDFEGTADIGLDEWIILKIIINGSEGEFYLNNEEKPVLVVKNMKHGDSRGAI HHHHCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCCCEE GLFVDIGTEGFFKDLDITLCD EEEEEECCCCCEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA