| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873548
Identifier: 116873548
GI number: 116873548
Start: 2162968
End: 2163723
Strand: Direct
Name: 116873548
Synonym: lwe2132
Alternate gene names: NA
Gene position: 2162968-2163723 (Clockwise)
Preceding gene: 116873547
Following gene: 116873549
Centisome position: 76.86
GC content: 38.76
Gene sequence:
>756_bases ATGAACGAAGCAGTAAAAACACTTGATGGCTGGTTTTGCCTCCATGATTTCCGTTCCATTGACTGGGCAGCTTGGCGTGA ATTAAACCCAGCAAATCAAGAATTAATGTTAAATGAATTAAGTCATTTTTTAAGTGATATGGAAATTACCAAAAATATCG GTGAAGGTGAACATACTATATACAGCATTCTTGGGCAAAAAGCAGACTTGGTGTTTTTCACTTTACGTGATTCACTAGAA GCTTTAAATGAAGTTGAAAATCGTTTTAACAAGTTGGCTATTGCTGACTATTTATTACCTACGTATTCCTACATCTCTGT GGTGGAATTGAGTAATTATCTCGCTTCTCATATGGCGGGCGGTGAAGACCCTTATCAAAACAAAGGTGTCCGAGCTCGAC TTTATCCCGCACTTCCACCTAAAAAACATATTTGCTTCTATCCTATGAGCAAAAAACGTGATGGTGCCGACAATTGGTAT ATGCTTCCTATGGATGAGCGTCAAAAACTTATTCGCGATCATGGACTAATTGGTAGAAGCTATGCTGGAAAAGTACAACA AATCATTGGAGGATCGATTGGTTTTGATGATTACGAATGGGGTGTCACGTTATTCTCAGACGATGCACTGGAATTCAAAC GAATCGTGACAGAAATGCGCTTTGATGAGGCGAGTGCCCGTTATGCAGAATTTGGTTCTTTCTTTATCGGCAATCTTTTA CCATCCGAAAATCTCTCTAAATTATTTACCATGTAA
Upstream 100 bases:
>100_bases GTCCTTTTGAAACATGATTTTCACAAACAGCGAATCGGACGAACTACTTTCGATATGGTACACTTTAGTTAGTGATATTC TAAACAAGGAGTGATACATA
Downstream 100 bases:
>100_bases TAATAGAATTTGGAATTTCTTTTAACAAGTCTGCTTTTTTAATGATTTGGTTAGGGAATTCCATTTTTTATTTCATAAAA CTAACATTTTTGTAAGGATA
Product: putative heme peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNEAVKTLDGWFCLHDFRSIDWAAWRELNPANQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLE ALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY MLPMDERQKLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL PSENLSKLFTM
Sequences:
>Translated_251_residues MNEAVKTLDGWFCLHDFRSIDWAAWRELNPANQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLE ALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY MLPMDERQKLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL PSENLSKLFTM >Mature_251_residues MNEAVKTLDGWFCLHDFRSIDWAAWRELNPANQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLE ALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY MLPMDERQKLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL PSENLSKLFTM
Specific function: Unknown
COG id: COG3253
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0447 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010644 - InterPro: IPR011008 [H]
Pfam domain/function: PF06778 Chlor_dismutase [H]
EC number: NA
Molecular weight: Translated: 28854; Mature: 28854
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEAVKTLDGWFCLHDFRSIDWAAWRELNPANQELMLNELSHFLSDMEITKNIGEGEHTI CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH YSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAG HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWYMLPMDERQKLIRDHGLIGRS CCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCH YAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL HHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSENLSKLFTM CCCHHHHHHCC >Mature Secondary Structure MNEAVKTLDGWFCLHDFRSIDWAAWRELNPANQELMLNELSHFLSDMEITKNIGEGEHTI CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH YSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAG HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWYMLPMDERQKLIRDHGLIGRS CCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCH YAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL HHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSENLSKLFTM CCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]