| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is feoB [H]
Identifier: 116873542
GI number: 116873542
Start: 2157596
End: 2159590
Strand: Direct
Name: feoB [H]
Synonym: lwe2126
Alternate gene names: 116873542
Gene position: 2157596-2159590 (Clockwise)
Preceding gene: 116873541
Following gene: 116873543
Centisome position: 76.67
GC content: 38.9
Gene sequence:
>1995_bases ATGAGCCAAAATACATATTGTTTACTTGGAAACCCAAATACTGGGAAAACTTCTTTATTTAATGCGTTAACAGGCTCTTA TGAATATGTAGGAAATTGGAGCGGAGTGACCGTCGAAAAAAAAGTCGGTACTTTACGTTCAAAAACAGGAAAATTAATTG ATTTACCTGGTATTTATGATTTAAATCCTATTTCTCGTGATGAAACAGTCGTCACTAGATTTTTATTGGAAGAAAAATTC GATTGTATGTTAAACATTGTTGATTCATCGCAAATTGAACGCAATTTAAATTTAACCATCCAACTACTTGAGTTTGGCGC ACCAGTCGTGATGGGACTTAACATGGTCGATGTCGCTGCGGGTCGTGGCATTCATTTAAATATCCAAAATTTAGCGAAAA AACTGCGCATTCCGATTTTGCCAGTAGTCGCTCGTTCTGGAAAAGGTACTGATGAAATTTTATCTACTTTATCCGAAAAG CATGTGGCGCCAGCGATTCCGCTAGTGTTACCATACGGCGAGCTCGCGGAGACAGCAATCGCTGAAATCCAGTCATTAAC AAAAGACATCATTCCTACTAAACAATCTCGTTGGCTAGCAGTTCAATTTCTTTCCAAAAATGAAGTCACGGAAGAATTTT TAGCTTCTAATTCTGCGTTTGAACAATTGAAAAAAATCCGAACGGAACTAGAAACTGCCCTTGAAGGAAAGTTAGAAAAT CATTTCCACCAAATTCGGGTAAATTACATTCATGATATTTGTTTGACCTCAGTCGAATATACGCGCAATTCGGATATTCC ACTATCAGACAAGCTCGATAAAATTTTTACACACAAGTTTTTCGGGATTCCGATTTTTCTTGGAATTATGTGGTTAATTT TTCAAATAACTTTTACGTGGGTTGGCGCACCGCTTTCCGACTTACTTGATGGTTTTATCAGCGGATCGCTTACGGATTGG GTAACATCTTTCTTAACAACGATTGGTGCATCTGGTTTTATCATTGATTTGGTCGCTGAAGGAATTATCGCTGGCGTGGG TGGCGTTCTTGTCTTCGTTCCGCAAATTTTGGTTATTTTCTTCTTCATTTCTGTCTTAGAAGATTCAGGATATATGGCCA GAATAGCAGTTGTTATGGACCGAGTAATGGAAATTTTCGGCTTAAATGGGAAAGCTTTTATCCCAATGATCATCGGGTTT GGCTGTAACGTACCAGGAATTATGGCAGCACGTTCCATCGAAGAATCCAAAGAACGAACACTAACGATTCTAGTTTCTCC ATTTATGTCCTGTTCCGCCCGTCTTCCAGTTTATGCCCTTTTCGTTGGCGTATTTTTCGAAAAATATCAAGCACTTGTCG TATTGTCACTTTACGTTATCGGCATTTTAATGGCACTGATTGTCACTAAAATCCTTTCGAAAACATTACTTAAAAAAGAT AATTCCGTGTTTGTCGTCGAATTACCACCTTACCGCTTGCCATCACTTAAAACTTTATGGCGTAGCACATGGGAAAAAGG AAAAGGCTTCTTGCGTAAAGCAGGGACATTTATTTTTGCAGGTTCCGTTATCATTTGGTTGTTAAACTATGCTGGGCCGT CCGGACTTGATGTACCTATGGGTGAAAGTTTCTTAGCCATCATCGGCGGAATGTTAGCACCGTTACTTGTTCCACTAGGA TTTGGCACTTGGCAAGCAGGCGCAACTCTTATTCCTGGATTTTTAGCAAAAGAAGTAGTCGTTTCAACCATGGCAATTAT TTATGCTGTTGGAGAAAGTTCCATGGGTAGTGTTGTTAGCACTTTCTATACGCCACTTTCGGCTTATTGCTTTATGTTAT TCATCTTGCTCTATATCCCTTGTTTAGCAACAGTTGCAGCCATTCGAAAAGAAACTAGTTCATGGAAATGGACTGCATTT TCAGTTGCTTATCCACTTGTTACAGCTTATGTTTTAGTATTTCTTGTTTATCAAATTGGCAGTCTATTCGTTTAA
Upstream 100 bases:
>100_bases AACAAAAAGGACTGTTTGGTGGTCCATGTACTTTTGAAACAAAAGGTCAATATATCAGTATTAGACAGTGTGATGCTTGT GCCATTATGGTGGAACGCCG
Downstream 100 bases:
>100_bases GAGAGGATGTTTTTTCATGAGTATTATTGTTAATTTACTACTTGGCGGAGCAATTTTTGGGTATACCATTTATGCCATCA TACAATTTGTAAAACGTAGC
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 664; Mature: 663
Protein sequence:
>664_residues MSQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKF DCMLNIVDSSQIERNLNLTIQLLEFGAPVVMGLNMVDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTDEILSTLSEK HVAPAIPLVLPYGELAETAIAEIQSLTKDIIPTKQSRWLAVQFLSKNEVTEEFLASNSAFEQLKKIRTELETALEGKLEN HFHQIRVNYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKFFGIPIFLGIMWLIFQITFTWVGAPLSDLLDGFISGSLTDW VTSFLTTIGASGFIIDLVAEGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGF GCNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKYQALVVLSLYVIGILMALIVTKILSKTLLKKD NSVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLG FGTWQAGATLIPGFLAKEVVVSTMAIIYAVGESSMGSVVSTFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAF SVAYPLVTAYVLVFLVYQIGSLFV
Sequences:
>Translated_664_residues MSQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKF DCMLNIVDSSQIERNLNLTIQLLEFGAPVVMGLNMVDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTDEILSTLSEK HVAPAIPLVLPYGELAETAIAEIQSLTKDIIPTKQSRWLAVQFLSKNEVTEEFLASNSAFEQLKKIRTELETALEGKLEN HFHQIRVNYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKFFGIPIFLGIMWLIFQITFTWVGAPLSDLLDGFISGSLTDW VTSFLTTIGASGFIIDLVAEGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGF GCNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKYQALVVLSLYVIGILMALIVTKILSKTLLKKD NSVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLG FGTWQAGATLIPGFLAKEVVVSTMAIIYAVGESSMGSVVSTFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAF SVAYPLVTAYVLVFLVYQIGSLFV >Mature_663_residues SQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKFD CMLNIVDSSQIERNLNLTIQLLEFGAPVVMGLNMVDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTDEILSTLSEKH VAPAIPLVLPYGELAETAIAEIQSLTKDIIPTKQSRWLAVQFLSKNEVTEEFLASNSAFEQLKKIRTELETALEGKLENH FHQIRVNYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKFFGIPIFLGIMWLIFQITFTWVGAPLSDLLDGFISGSLTDWV TSFLTTIGASGFIIDLVAEGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGFG CNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKYQALVVLSLYVIGILMALIVTKILSKTLLKKDN SVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLGF GTWQAGATLIPGFLAKEVVVSTMAIIYAVGESSMGSVVSTFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAFS VAYPLVTAYVLVFLVYQIGSLFV
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=741, Percent_Identity=35.357624831309, Blast_Score=399, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 73058; Mature: 72927
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYD CCCCCEEEEECCCCCHHHHHHHHCCCCCEECCCCCEEEHHHHHHHHHCCCCEEECCCCCC LNPISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTIQLLEFGAPVVMGLNMVDVAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCHHHHHC GRGIHLNIQNLAKKLRIPILPVVARSGKGTDEILSTLSEKHVAPAIPLVLPYGELAETAI CCCEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHH AEIQSLTKDIIPTKQSRWLAVQFLSKNEVTEEFLASNSAFEQLKKIRTELETALEGKLEN HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HFHQIRVNYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKFFGIPIFLGIMWLIFQITFTW HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAPLSDLLDGFISGSLTDWVTSFLTTIGASGFIIDLVAEGIIAGVGGVLVFVPQILVIF HCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGFGCNVPGIMAARSIEESKERT HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCE LTILVSPFMSCSARLPVYALFVGVFFEKYQALVVLSLYVIGILMALIVTKILSKTLLKKD EEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NSVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPM CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC GESFLAIIGGMLAPLLVPLGFGTWQAGATLIPGFLAKEVVVSTMAIIYAVGESSMGSVVS CCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAFSVAYPLVTAYVLVFLVYQIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH SLFV HHCC >Mature Secondary Structure SQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYD CCCCEEEEECCCCCHHHHHHHHCCCCCEECCCCCEEEHHHHHHHHHCCCCEEECCCCCC LNPISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTIQLLEFGAPVVMGLNMVDVAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCHHHHHC GRGIHLNIQNLAKKLRIPILPVVARSGKGTDEILSTLSEKHVAPAIPLVLPYGELAETAI CCCEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHH AEIQSLTKDIIPTKQSRWLAVQFLSKNEVTEEFLASNSAFEQLKKIRTELETALEGKLEN HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HFHQIRVNYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKFFGIPIFLGIMWLIFQITFTW HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAPLSDLLDGFISGSLTDWVTSFLTTIGASGFIIDLVAEGIIAGVGGVLVFVPQILVIF HCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGFGCNVPGIMAARSIEESKERT HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCE LTILVSPFMSCSARLPVYALFVGVFFEKYQALVVLSLYVIGILMALIVTKILSKTLLKKD EEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NSVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPM CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC GESFLAIIGGMLAPLLVPLGFGTWQAGATLIPGFLAKEVVVSTMAIIYAVGESSMGSVVS CCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAFSVAYPLVTAYVLVFLVYQIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH SLFV HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA