| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873219
Identifier: 116873219
GI number: 116873219
Start: 1834732
End: 1835049
Strand: Direct
Name: 116873219
Synonym: lwe1803
Alternate gene names: NA
Gene position: 1834732-1835049 (Clockwise)
Preceding gene: 116873218
Following gene: 116873251
Centisome position: 65.2
GC content: 33.65
Gene sequence:
>318_bases ATGGCTAATAAACCTATTGTTGAAGATTTAAGCCCTGCATTCAAAGAGCACTTTTCTAACCTATCAACTTATACAAATGA TATTTTATTTAAAGAGGTATGGTTAGATGAACAATTAGATTCAAAAACTCGAAGTATTGTTACACTTAGTATTTTAGCAG CGCTTGGTAATTCAGAACAAATGACTTTTCACTTGGAGACAGCGCGGAATAATGGTGTATCGAAAAAGGAATTAACTAGT TTATGCACACATTTGGCTTTTTATATCGGCTGGCCTCAAACAATGCTACTAGTGGATAAAATACTGGTTACAGATTAG
Upstream 100 bases:
>100_bases AAACAAAATTTATTTATTTTATTAAATGAAGTTCCGCTTCAAAATTGGTCTTTTGGAGAAGGTTATGCACAAATGATTTA AAAAGAAAAGAGGATAAAAA
Downstream 100 bases:
>100_bases TTCATAAAAAAACCCTCACTCAAAAGAGTGAGGGTTTTTCAAATTATTTAGCTAATGCTTTTTTTGCTGAATCAGCAAGT GTGTTGAATGATGCAATATC
Product: carboxymuconolactone decarboxylase family protein
Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2
Alternate protein names: Carboxymuconolactone Decarboxylase Family Protein; 4-Carboxymuconolactone Decarboxylase; Gamma-Carboxymuconolactone Decarboxylase Subunit; 4-Carboxymuconolactone Decarboxylase Protein; Gamma-Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Protein; Gamma-Carboxymuconolactone Decarboxylase; Decarboxylase
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MANKPIVEDLSPAFKEHFSNLSTYTNDILFKEVWLDEQLDSKTRSIVTLSILAALGNSEQMTFHLETARNNGVSKKELTS LCTHLAFYIGWPQTMLLVDKILVTD
Sequences:
>Translated_105_residues MANKPIVEDLSPAFKEHFSNLSTYTNDILFKEVWLDEQLDSKTRSIVTLSILAALGNSEQMTFHLETARNNGVSKKELTS LCTHLAFYIGWPQTMLLVDKILVTD >Mature_104_residues ANKPIVEDLSPAFKEHFSNLSTYTNDILFKEVWLDEQLDSKTRSIVTLSILAALGNSEQMTFHLETARNNGVSKKELTSL CTHLAFYIGWPQTMLLVDKILVTD
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.44
Molecular weight: Translated: 11889; Mature: 11758
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKPIVEDLSPAFKEHFSNLSTYTNDILFKEVWLDEQLDSKTRSIVTLSILAALGNSEQ CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHCCCCC MTFHLETARNNGVSKKELTSLCTHLAFYIGWPQTMLLVDKILVTD EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure ANKPIVEDLSPAFKEHFSNLSTYTNDILFKEVWLDEQLDSKTRSIVTLSILAALGNSEQ CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHCCCCC MTFHLETARNNGVSKKELTSLCTHLAFYIGWPQTMLLVDKILVTD EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate
Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA