| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is malE [C]
Identifier: 116873163
GI number: 116873163
Start: 1770341
End: 1771582
Strand: Direct
Name: malE [C]
Synonym: lwe1747
Alternate gene names: 116873163
Gene position: 1770341-1771582 (Clockwise)
Preceding gene: 116873149
Following gene: 116873164
Centisome position: 62.91
GC content: 37.6
Gene sequence:
>1242_bases ATGAAGAAAAAAATGTTTGTAATTTTAGCTTTGGTCTTATCACTTAGTTTGGTCCTAATGGGTTGTGGGTCAAAGGACGA TGCAAAATCAGGCGATTCCAAAGTGCTAAATGTTTGGGCAATGGGAGATGAAGCCAAGTCATTAAAAGAACTCGCACAAA AATTCACGAAAGAAACTGGTATTGAAGTAAAAGTCCAAGTTATCCCTTGGGCAAATGCACATGATAAATTACTTACTGCT GTTGCTTCTAAATCTGGTCCTGATGTAGTACAAATGGGAACTACTTGGATGCCAGAATTTGTTGAAGCTGGGGCATTACT TGATATTACAAAAGATGTCGAAAAAAGTAAAAATATGAACTCAGATTTATTTTTCCCCGGTTCAGTGAAAACTACACAAT TTGACGGAAAAACTTACGGTGTTCCTTGGTATGCAGAAACTCGTGTATTATTTTATCGTACTGACTTACTGAAAAAAGTT GGTTATAATGAAGCACCAAAAACATGGGATGAGCTATCTGATGCTGCACTTAAACTTTCTAAACGTGGAAAAGATATGTA TGGTTTTGCAATTGATCCAAATGAACAAACAACTGGTTTCATTTTCGGACGCCAAAACGGCTCCCCTCTTTTTGATAAAG ATGGCAAACCAGTTTTCAATAAAAAACCATTCGTAGATACTGTCACTTATTTAGACAGTTTCATCAAAAACGGTTCCGCA CCAGACACTGACCTTGGATTAGATGCTTCACAAAGCTTTGGTGGCGACGGAATTGTGCCGATGTTCATGAGTGGTCCTTG GATGGTTAATACACTCAAAGACACTGCTCCTGACATTGACGGCAAATGGGCTACTGCTGTATTACCTAAAAAAGAAAATA ATGAATCCAGCCTAGGTGGCGCTAACCTTTCCATTTTCAAATATAGTGATAAAAAAGATGATGCACTAAAATTCATGGAT TATATGAGTCAACCTGATGTGCAATTATCGTGGTTAAAAGATACTAACTCCATGCCAGCTCGTATGGATGCTTGGGAAGA TGACATGCTAAAAAACGACCCTTACTACAAAGTATTCGGTGAACAAATGAAGACTGCTGAACCAATGCCACTTATCCCAC AATTTGAAGAAATTGCGCAATTATATGGCAAATCTTGGGAGCAAATTTATCGTGGTGGTGTAGATGTACAAACACAAATG GATTCCTTTAACGATCAAGTAGAAACACTTCTTAAAAAATAA
Upstream 100 bases:
>100_bases CCCGTACGGTACGCTTTTATTCCGTACAATAGTTTTTATTCTTTAACAGCTTCAGTCAGGAAAAGTTGCTTTGAAAAAAA CAAAAAATGGAGGAAAAATC
Downstream 100 bases:
>100_bases CGAATAAAAAGGGCAAATGATCCACTTTGCCATTTGCCCTTTTAGAATGGAACTGATGTTATGAAACAATTTTTAAATAA AAACACCCCCTATTTGTTTA
Product: ABC transporter, substrate-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKKKMFVILALVLSLSLVLMGCGSKDDAKSGDSKVLNVWAMGDEAKSLKELAQKFTKETGIEVKVQVIPWANAHDKLLTA VASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKV GYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGKPVFNKKPFVDTVTYLDSFIKNGSA PDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFMD YMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGVDVQTQM DSFNDQVETLLKK
Sequences:
>Translated_413_residues MKKKMFVILALVLSLSLVLMGCGSKDDAKSGDSKVLNVWAMGDEAKSLKELAQKFTKETGIEVKVQVIPWANAHDKLLTA VASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKV GYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGKPVFNKKPFVDTVTYLDSFIKNGSA PDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFMD YMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGVDVQTQM DSFNDQVETLLKK >Mature_413_residues MKKKMFVILALVLSLSLVLMGCGSKDDAKSGDSKVLNVWAMGDEAKSLKELAQKFTKETGIEVKVQVIPWANAHDKLLTA VASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKV GYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGKPVFNKKPFVDTVTYLDSFIKNGSA PDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFMD YMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGVDVQTQM DSFNDQVETLLKK
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=378, Percent_Identity=26.4550264550265, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787569, Length=396, Percent_Identity=24.2424242424242, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46098; Mature: 46098
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKMFVILALVLSLSLVLMGCGSKDDAKSGDSKVLNVWAMGDEAKSLKELAQKFTKETG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC IEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMN CEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHCCCEEEHHHHHHHHCCCC SDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKLS CCEEECCCCEEEEECCEEECCCCEECCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHH KRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGKPVFNKKPFVDTVTYLDSFIKNGSA HCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGG CCCCCCCCCCCCCCCCCCEEHEECCCEEEEEHHHCCCCCCCCEEEEECCCCCCCCCCCCC ANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFG CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHH EQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGVDVQTQMDSFNDQVETLLKK HHHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKMFVILALVLSLSLVLMGCGSKDDAKSGDSKVLNVWAMGDEAKSLKELAQKFTKETG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC IEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMN CEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHCCCEEEHHHHHHHHCCCC SDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKLS CCEEECCCCEEEEECCEEECCCCEECCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHH KRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGKPVFNKKPFVDTVTYLDSFIKNGSA HCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGG CCCCCCCCCCCCCCCCCCEEHEECCCEEEEEHHHCCCCCCCCEEEEECCCCCCCCCCCCC ANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFG CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHH EQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGVDVQTQMDSFNDQVETLLKK HHHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA