| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is insJ [C]
Identifier: 116873031
GI number: 116873031
Start: 1622728
End: 1623279
Strand: Direct
Name: insJ [C]
Synonym: lwe1615
Alternate gene names: 116873031
Gene position: 1622728-1623279 (Clockwise)
Preceding gene: 116873025
Following gene: 116873032
Centisome position: 57.66
GC content: 38.77
Gene sequence:
>552_bases ATGGCAAAATATAGTTCTGAATTGAAGTTAAAGATAGTGCAAGAATATCTTGGCAAGAAAGGTGGTTATACCTATCTAGC GAAAAAACATGGTATTAAAACGGTGCAGCAAGTTCAGAAATGGGTGAACGCTTATCAACAATTCGGTATGGAAGGACTTT TACGAAAGCAGAAAAATACACATTATTCTTTTCAAGCGAAGTTAAATGCGATAGAGTTATATCAAACAAGGGAGCTATCC TATCGTGAAATTGCTAACCAAATTGGTCTCAATAATCCTGCATTAATCGCTAGTTGGATGAAAAAATTTCGGGAAGACGG GGTAGATGGGCTCTCCAAAACGAAAGGACGACCACCAAAAATGGATGCTAAAAAAAGAAAGAAATCTGTACAGGATAACC TCACTCAGCTTGAAAAGCTAGAGAAAGAGAATCGCATGTTAAAAATAGAGCTCTCTTATTTAAAGGAGTTGAGGAGGCTG CGTTTAGAGGACGAACGCAAAATGAGCGAATTGCACGAGTCATTCACAGCCTCCGAAGACGCTTCCGATTAA
Upstream 100 bases:
>100_bases ACCTATGTATTTTTATATAAAAAAACAGCCCCGAAAGGCTGTTTTGAACCGACCCCCGAAAGTTAGACCAAAAATCTAAC TTTTGGAGGTCGGTATTTTT
Downstream 100 bases:
>100_bases CTGAAATCTTAGAAACCCTTCGGTTTCCTAAATCTACCTATATGTATTGGCAAAAGCATTTGAATAGAGAAAATCCGACA GAAGAAGTAGAGAATGAATT
Product: transposase, putative
Products: NA
Alternate protein names: ORFA [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAKYSSELKLKIVQEYLGKKGGYTYLAKKHGIKTVQQVQKWVNAYQQFGMEGLLRKQKNTHYSFQAKLNAIELYQTRELS YREIANQIGLNNPALIASWMKKFREDGVDGLSKTKGRPPKMDAKKRKKSVQDNLTQLEKLEKENRMLKIELSYLKELRRL RLEDERKMSELHESFTASEDASD
Sequences:
>Translated_183_residues MAKYSSELKLKIVQEYLGKKGGYTYLAKKHGIKTVQQVQKWVNAYQQFGMEGLLRKQKNTHYSFQAKLNAIELYQTRELS YREIANQIGLNNPALIASWMKKFREDGVDGLSKTKGRPPKMDAKKRKKSVQDNLTQLEKLEKENRMLKIELSYLKELRRL RLEDERKMSELHESFTASEDASD >Mature_182_residues AKYSSELKLKIVQEYLGKKGGYTYLAKKHGIKTVQQVQKWVNAYQQFGMEGLLRKQKNTHYSFQAKLNAIELYQTRELSY REIANQIGLNNPALIASWMKKFREDGVDGLSKTKGRPPKMDAKKRKKSVQDNLTQLEKLEKENRMLKIELSYLKELRRLR LEDERKMSELHESFTASEDASD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS150/IS1296 orfA family [H]
Homologues:
Organism=Escherichia coli, GI1789980, Length=164, Percent_Identity=26.8292682926829, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 21421; Mature: 21290
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYSSELKLKIVQEYLGKKGGYTYLAKKHGIKTVQQVQKWVNAYQQFGMEGLLRKQKNT CCCCCHHHHHHHHHHHHCCCCCEEHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHCCC HYSFQAKLNAIELYQTRELSYREIANQIGLNNPALIASWMKKFREDGVDGLSKTKGRPPK CCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCC MDAKKRKKSVQDNLTQLEKLEKENRMLKIELSYLKELRRLRLEDERKMSELHESFTASED CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC ASD CCC >Mature Secondary Structure AKYSSELKLKIVQEYLGKKGGYTYLAKKHGIKTVQQVQKWVNAYQQFGMEGLLRKQKNT CCCCHHHHHHHHHHHHCCCCCEEHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHCCC HYSFQAKLNAIELYQTRELSYREIANQIGLNNPALIASWMKKFREDGVDGLSKTKGRPPK CCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCC MDAKKRKKSVQDNLTQLEKLEKENRMLKIELSYLKELRRLRLEDERKMSELHESFTASED CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC ASD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8071209 [H]