Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872842

Identifier: 116872842

GI number: 116872842

Start: 1419816

End: 1420364

Strand: Direct

Name: 116872842

Synonym: lwe1426

Alternate gene names: NA

Gene position: 1419816-1420364 (Clockwise)

Preceding gene: 116872841

Following gene: 116872843

Centisome position: 50.45

GC content: 30.24

Gene sequence:

>549_bases
ATGAAACTAAAACGTTTACAAAAAATGAGTTCATTTCTGCATGTTGTACTTAAAATTTTATCGGTAAGTTCAGTGGTAAT
AGCAATAATCGTCTTTTTTATGAAATTATTTAATAGCAAAAATATAATAATGAACAAGTTGGAATCAGATACTATTTTTT
ATTTTCAAACAGAATTTTTTGCCATTCCAGATAATCAGCAGTATATTCAAACGGAGCAGTGGATTTTAGTTGGTGTTGCC
ATTTTTACTTGTATTTTAATCGCGTGGCTACTATGGATTGCTAGTCTGATTTTTAAGGACTTATCAACTGGATTTACGCC
TTTCAGTGAGATTGAAATCAATAGATTGCGGAAAATTGCAGGCTTATTACTAATTTATGCCTTAGCTCCACAAATATTGT
ATTCTGTTTTGCATACCATACTAATACCGGGTTATAGTTTTACTTTTGGACTGAACATGTCATTTTTCTTTGCAATTATT
TTTTATTGTTTAACAGAGATATTTCGTTATGGGGCGTTGTTGCAAAAAGAATCAGATGAAACTTTATGA

Upstream 100 bases:

>100_bases
TTTTTATGTTAAGAATTAATTATTTAACGTTTATCATTAAAAATATATTGACACGAACTATTATTTATAGGTATAATCAA
GAAAAAAGGGAGAGATTCAC

Downstream 100 bases:

>100_bases
ATGGGGCGAAAAATGATGGCAATTGTATTGAGGCTGGATCGTATAATGGCCGATCGTAAAATATCATTAAATCAACTATC
CAAAGAAGTCGGCGTAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKLKRLQKMSSFLHVVLKILSVSSVVIAIIVFFMKLFNSKNIIMNKLESDTIFYFQTEFFAIPDNQQYIQTEQWILVGVA
IFTCILIAWLLWIASLIFKDLSTGFTPFSEIEINRLRKIAGLLLIYALAPQILYSVLHTILIPGYSFTFGLNMSFFFAII
FYCLTEIFRYGALLQKESDETL

Sequences:

>Translated_182_residues
MKLKRLQKMSSFLHVVLKILSVSSVVIAIIVFFMKLFNSKNIIMNKLESDTIFYFQTEFFAIPDNQQYIQTEQWILVGVA
IFTCILIAWLLWIASLIFKDLSTGFTPFSEIEINRLRKIAGLLLIYALAPQILYSVLHTILIPGYSFTFGLNMSFFFAII
FYCLTEIFRYGALLQKESDETL
>Mature_182_residues
MKLKRLQKMSSFLHVVLKILSVSSVVIAIIVFFMKLFNSKNIIMNKLESDTIFYFQTEFFAIPDNQQYIQTEQWILVGVA
IFTCILIAWLLWIASLIFKDLSTGFTPFSEIEINRLRKIAGLLLIYALAPQILYSVLHTILIPGYSFTFGLNMSFFFAII
FYCLTEIFRYGALLQKESDETL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21097; Mature: 21097

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKRLQKMSSFLHVVLKILSVSSVVIAIIVFFMKLFNSKNIIMNKLESDTIFYFQTEFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEE
AIPDNQQYIQTEQWILVGVAIFTCILIAWLLWIASLIFKDLSTGFTPFSEIEINRLRKIA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GLLLIYALAPQILYSVLHTILIPGYSFTFGLNMSFFFAIIFYCLTEIFRYGALLQKESDE
HHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TL
CC
>Mature Secondary Structure
MKLKRLQKMSSFLHVVLKILSVSSVVIAIIVFFMKLFNSKNIIMNKLESDTIFYFQTEFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEE
AIPDNQQYIQTEQWILVGVAIFTCILIAWLLWIASLIFKDLSTGFTPFSEIEINRLRKIA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GLLLIYALAPQILYSVLHTILIPGYSFTFGLNMSFFFAIIFYCLTEIFRYGALLQKESDE
HHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA