| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is mutL [H]
Identifier: 116872836
GI number: 116872836
Start: 1411901
End: 1413712
Strand: Direct
Name: mutL [H]
Synonym: lwe1420
Alternate gene names: 116872836
Gene position: 1411901-1413712 (Clockwise)
Preceding gene: 116872835
Following gene: 116872837
Centisome position: 50.17
GC content: 36.87
Gene sequence:
>1812_bases ATGGCTAAACATATTGTTGAATTAACCGATGCTTTATCCAATAAAATAGCGGCGGGAGAAGTTGTAGAAAGACCTGCTTC TGTTGTTAAAGAATTAGTAGAAAATGCCATTGACGCAGGGAGCACCGTTATCGATATTTTGGTGGAAGAAGCGGGATTAA ATAAAATTACAATTATTGATAACGGTAGTGGTATTGAAGAAGAAGATGTTGCAACCGCATTTCTACGCCACGCCACAAGT AAAATCAAAAATGAAGCAGATTTATTCCGTGTGCATACACTAGGTTTCCGCGGTGAAGCTTTACCTAGTATAGCTTCGGT TTCCCATTTATCCATGGAAACCTCTACTGGCGAAACAAAGGGAACGACTATTTCCCTTGAGGGCGGAAAAATCATGGAGC AAAAAAGCGGCCATGCCAGAAAAGGAACGCAAATCGAAGTTTCGCAACTATTCTTTAATACACCAGCTCGATTAAAATAC TTAAAAAGTTTACCAACGGAACTTGGAAATATTACCGACATTTTAAATCGACTTGCCTTAGCACATCCGGATATTAGTTT CCGCTTTTCGCATAACGGAAAACCTTTACTACAAACAAATGGTAATGGTGATTTGCGACAAGTCATTGCAGCTATTTATG GCGTTTCAATTGCTCGGAAATCAATTCCAGTGAAAGCAGAGTCACTCGATTTTAACATTTCAGGATACGCTGTGTTGCCA GAAGTGAATCGTTCTAATCGTAACTATATCTCGACCATTATTAATGGCCGCTTTATCAAAAATTTTGCATTAGTTAAAGC AATTCAAGAAGGATATCACACACTTCTACCTATTGGGCGTTTTCCAATTATCGTTTTACAAATTGAAATGGATCCAATTA TTGTAGATGTCAATGTTCATCCTGCAAAATTAGAAGTTCGTTTGAGTAAAGAAAAAGAACTTGGCCAGCTCATTAGTCAA ATGATTAAAGAGGCTTTTCATCAATTGCAATTAATACCAGATGGAGAAGTTTCGAAAAAACAAAAAGAGCAACAAAAATC TGAACAAATTCAGATGTCATTTGAAGAAAATAAGCTACCAAAAGAAACACCAACACTTTTCTCCAAACCGAATGTCCCAG AATATGTTCCTTCTGATGAAGATACATCTCGAGAAGACGATTTTATTTTAGAAACACTGCCTACTTATGATTCAAAAATT CAACCTGAACAAGCAGAAGAGCCAAAAGAACGGATTCCTAAAATGTATCCAATTGGTCAAATGCATGCAACCTATATCTT TGCTCAAAACGAAAATGGTTTGTATATTATTGACCAACATGCCGCACAGGAACGGATTAAATATGAATTTTATCGGGAGA AAATTGGCGAAGTAAGCCGCGAACTGCAAGAATTACTAGTACCAATCGTCTTAGAATTCCCAACAGATGAATATGTTCGT TTGGAAGAACAAAAAACAAAATTAGAAGAAGTTGGTGTTTTTCTTGAAAACTTCGGACAAAATAGCTTTATTATCCGTGC ACATCCAACTTGGTTTCCAAAAAATCAAGAAGAGGAAATGTTGCGGGAAATTATCGATGAAGCACTTTCGGCGCCGAGTA TCAGCATTCATAAGTTAAGAGAAGATACAGCGATTATGATGAGTTGCAAAAAATCAATTAAAGCAAATCACTATTTGACT ATGCAAGATATGGAAGCTTTGCTTGATACACTGAGAGAAGCAAGCGATCCATTCACATGTCCCCATGGTCGTCCTGTTAT TATTCAATATTCGACTTACGAACTGGAAAAAATGTTTAAACGCGTAATGTAA
Upstream 100 bases:
>100_bases TGCATCGATGAATATTATGCAAATGACACCCATGGACGCAATGAACAAGCTATACGAGCTTCAAAGCAAAATCCATTAAA AGAGAAAGGCGGGTTTTTGA
Downstream 100 bases:
>100_bases AAGAGGAGGAATATCATTGGAGTTACCATTCTCTGGTCAACCGATCATCCCAGCAGCGCACAATCAAAAAGATATGGAAA AAATATTAGAACTAGATTTA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MAKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSGIEEEDVATAFLRHATS KIKNEADLFRVHTLGFRGEALPSIASVSHLSMETSTGETKGTTISLEGGKIMEQKSGHARKGTQIEVSQLFFNTPARLKY LKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFNISGYAVLP EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQ MIKEAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENKLPKETPTLFSKPNVPEYVPSDEDTSREDDFILETLPTYDSKI QPEQAEEPKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTDEYVR LEEQKTKLEEVGVFLENFGQNSFIIRAHPTWFPKNQEEEMLREIIDEALSAPSISIHKLREDTAIMMSCKKSIKANHYLT MQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKRVM
Sequences:
>Translated_603_residues MAKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSGIEEEDVATAFLRHATS KIKNEADLFRVHTLGFRGEALPSIASVSHLSMETSTGETKGTTISLEGGKIMEQKSGHARKGTQIEVSQLFFNTPARLKY LKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFNISGYAVLP EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQ MIKEAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENKLPKETPTLFSKPNVPEYVPSDEDTSREDDFILETLPTYDSKI QPEQAEEPKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTDEYVR LEEQKTKLEEVGVFLENFGQNSFIIRAHPTWFPKNQEEEMLREIIDEALSAPSISIHKLREDTAIMMSCKKSIKANHYLT MQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKRVM >Mature_602_residues AKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSGIEEEDVATAFLRHATSK IKNEADLFRVHTLGFRGEALPSIASVSHLSMETSTGETKGTTISLEGGKIMEQKSGHARKGTQIEVSQLFFNTPARLKYL KSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFNISGYAVLPE VNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQM IKEAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENKLPKETPTLFSKPNVPEYVPSDEDTSREDDFILETLPTYDSKIQ PEQAEEPKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTDEYVRL EEQKTKLEEVGVFLENFGQNSFIIRAHPTWFPKNQEEEMLREIIDEALSAPSISIHKLREDTAIMMSCKKSIKANHYLTM QDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKRVM
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=36.969696969697, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI4505913, Length=342, Percent_Identity=31.8713450292398, Blast_Score=147, Evalue=4e-35, Organism=Homo sapiens, GI310128478, Length=342, Percent_Identity=31.8713450292398, Blast_Score=147, Evalue=4e-35, Organism=Homo sapiens, GI4505911, Length=312, Percent_Identity=30.7692307692308, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI189458898, Length=318, Percent_Identity=30.188679245283, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI189458896, Length=301, Percent_Identity=31.2292358803987, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI310128480, Length=296, Percent_Identity=30.0675675675676, Blast_Score=114, Evalue=4e-25, Organism=Homo sapiens, GI263191589, Length=232, Percent_Identity=32.7586206896552, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI91992162, Length=261, Percent_Identity=28.735632183908, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI91992160, Length=261, Percent_Identity=28.735632183908, Blast_Score=90, Evalue=5e-18, Organism=Escherichia coli, GI1790612, Length=531, Percent_Identity=32.015065913371, Blast_Score=233, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71991825, Length=306, Percent_Identity=33.9869281045752, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17562796, Length=351, Percent_Identity=29.9145299145299, Blast_Score=135, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6323819, Length=332, Percent_Identity=36.4457831325301, Blast_Score=183, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6324247, Length=378, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6325093, Length=384, Percent_Identity=24.21875, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323063, Length=338, Percent_Identity=24.8520710059172, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17136968, Length=324, Percent_Identity=34.8765432098765, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI17136970, Length=348, Percent_Identity=28.448275862069, Blast_Score=126, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 68156; Mature: 68025
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIID CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEE NGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSMETSTGETK CCCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHHHHHHEEECCCCCCC GTTISLEGGKIMEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLAL CCEEEECCCCHHHCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFNISGYAVLP CCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCEEECCCCEEEEC EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEECCCEEEEEECC PAKLEVRLSKEKELGQLISQMIKEAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENKLP CCEEEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHEEHHHHCCCC KETPTLFSKPNVPEYVPSDEDTSREDDFILETLPTYDSKIQPEQAEEPKERIPKMYPIGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCHHHHCCCCCCCCC MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTDEYVR EEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHEE LEEQKTKLEEVGVFLENFGQNSFIIRAHPTWFPKNQEEEMLREIIDEALSAPSISIHKLR HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH EDTAIMMSCKKSIKANHYLTMQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFK HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHH RVM HCC >Mature Secondary Structure AKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIID CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEE NGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSMETSTGETK CCCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHHHHHHEEECCCCCCC GTTISLEGGKIMEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLAL CCEEEECCCCHHHCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFNISGYAVLP CCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCEEECCCCEEEEC EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEECCCEEEEEECC PAKLEVRLSKEKELGQLISQMIKEAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENKLP CCEEEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHEEHHHHCCCC KETPTLFSKPNVPEYVPSDEDTSREDDFILETLPTYDSKIQPEQAEEPKERIPKMYPIGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCHHHHCCCCCCCCC MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTDEYVR EEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHEE LEEQKTKLEEVGVFLENFGQNSFIIRAHPTWFPKNQEEEMLREIIDEALSAPSISIHKLR HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH EDTAIMMSCKKSIKANHYLTMQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFK HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHH RVM HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]