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The map label for this gene is ymcA [H]

Identifier: 116872834

GI number: 116872834

Start: 1408825

End: 1409187

Strand: Direct

Name: ymcA [H]

Synonym: lwe1418

Alternate gene names: 116872834

Gene position: 1408825-1409187 (Clockwise)

Preceding gene: 116872833

Following gene: 116872835

Centisome position: 50.06

GC content: 35.54

Gene sequence:

>363_bases
GTGACCGTTTCAAAAGAAGAAATTATGAAAAAAGCGACAGAACTTCGTGATGCACTTCAACAGACAGAAGAAGTATCATT
TTACCGGCTAGCTGAGGAGAGAATAAACGCTAATTCCAAAGTAGCTGCGAAAGTTTCTAAAATAAAATCACTTCAAAAAG
AAGCAGTGAATTTAGAACATTATCAAAAAATTGAAGCAATGAAACAAACGGAGAGTCAAATTGATAATGTTCGTGCGGAT
ATTGATTCACTCCCAATTGTAACGGAATTCAGACGCGCCCAAGAAGACGCCAATGATCTATTACAGTCCATTACAACGGA
GATTACAACAAAAGTAACTACTGAACTTGAAAAAGAAAATTAA

Upstream 100 bases:

>100_bases
ATAACGTTAGACGAAAACACTGGAAAAGCGCAAAAAATTGACCGAATTCTCATCAATGAAGACCACCCATTTTCCTTTGA
TTAAGAATGGAGATGAAATT

Downstream 100 bases:

>100_bases
CCATTTAAAACTGCTGAAACACTAGCAGTTTTTTTCTTTTGAAGTCGCGGGGAAATGGAAATTTATGCTATAATGAAAGG
ATGAAAATGAAGTAAGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTVSKEEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKSLQKEAVNLEHYQKIEAMKQTESQIDNVRAD
IDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN

Sequences:

>Translated_120_residues
MTVSKEEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKSLQKEAVNLEHYQKIEAMKQTESQIDNVRAD
IDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
>Mature_119_residues
TVSKEEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKSLQKEAVNLEHYQKIEAMKQTESQIDNVRADI
DSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN

Specific function: May work together with ylbF to regulate community development [H]

COG id: COG4550

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016783
- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 13758; Mature: 13626

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSKEEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKSLQKEAVNLEH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YQKIEAMKQTESQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVSKEEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKSLQKEAVNLEH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YQKIEAMKQTESQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]