| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872693
Identifier: 116872693
GI number: 116872693
Start: 1266908
End: 1267822
Strand: Direct
Name: 116872693
Synonym: lwe1277
Alternate gene names: NA
Gene position: 1266908-1267822 (Clockwise)
Preceding gene: 116872691
Following gene: 116872698
Centisome position: 45.02
GC content: 35.41
Gene sequence:
>915_bases ATGAATAAAGAAATGAAATTAAAAGCCGCAGATGGATTAGAATTACATTTACATATTTGGGATGAGGTAGAAAAGCCAAT CGGTTTAATCCAAATTGTTCATGGAATGGCGGAGCACGGAGCAAGATATGATTTGTTTGCAAAACGTTTGAATCAAGCAG GGTATATTGTAGTAGCAGATGATCACCGTGGTTTTGGCAAATCAGCAATAAATGAAAGTTATTTAGGTCATTTAGACGGG GAAACAGGGTTTCAAAATATGATACAAGATGAAGTGAGTGTTCGAACCTATATAAAAGAAAATTATCCAAACTTGCCTTA TTTTATTTTTGCACATAGTATGGGGAGCTTCATTATTCGGACGTTTATGGCGCAACATCAAGTAGACGGGGTTATCCTTA GTGGTAGCGGCCTTCAACCCACAGCATTGCTAAAAATGGGTCAAATTATTACAAAATACCGTGTTAAAAAAGATGATAAA AAAAGAAGTGGGTTTTTAAATAAATTAGCTTTTTGGGGTTATAATAAGCCTTTTAATGAAAATCATCGTTTTAGTTGGCT TTCAAGAGATGTAGCCGTATATGAAGCTTATGAAAAAGACCCTTTTTGCGGACCAGTAGTCGGAACGAGTGGGTTTTTTC ATAATCTTTTTGAAGTAGTAAAAGTGAGCCAACAAAAAGAAACTTTGGAAAGCGTGCCGAAAGATTTACCCATTTTGTTA CTCTCAGGTAGTGATGATCCAGTGGGGCATTTTGGAAAAGATACACCAAAAATTGCTTTGGCATTAGAAAAAGCGGGAGT AGAAGATGTTACTTATAAAATATACGAAAATGCCCGTCATGAACTCGTAAATGAATTATGTAAGGAAACCGTTTTTCAAG ATGTGATTGATTGGTTAAATGCAAAAACAAGGTAA
Upstream 100 bases:
>100_bases TTTTAACTTGTTATACAAAAGTCCTAATAAAAGGCTGTTAAAGATTGAAATTACTTGCTCGGTGGTATACTAATTATAAG ATGAAATGGGAGGAAATCGT
Downstream 100 bases:
>100_bases CCTATTAGGCTACCTTGTTTTTAATTACGAATTTGACCATCTCCGAAAATAATGTATTTAGTGGAGGTGAGTTCAGTTAA CCCCATTGGTCCACGCGCAT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Acylglycerol Lipase; Hydrolase; Hydrolase Alpha/Beta Fold Family; Lipase; Hydrolase Alpha/Beta Hydrolase Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Alpha/Beta Hydrolase; Lysophospholipase Protein; Carboxylic Ester Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Monoacylglycerol Lipase; Monoglyceride Lipase; Alpha/Beta Hydrolase Family Protein; S33 Family Lysophospholipase; Alpha/Beta Fold Family Protein Hydrolase; Aminopeptidase; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MNKEMKLKAADGLELHLHIWDEVEKPIGLIQIVHGMAEHGARYDLFAKRLNQAGYIVVADDHRGFGKSAINESYLGHLDG ETGFQNMIQDEVSVRTYIKENYPNLPYFIFAHSMGSFIIRTFMAQHQVDGVILSGSGLQPTALLKMGQIITKYRVKKDDK KRSGFLNKLAFWGYNKPFNENHRFSWLSRDVAVYEAYEKDPFCGPVVGTSGFFHNLFEVVKVSQQKETLESVPKDLPILL LSGSDDPVGHFGKDTPKIALALEKAGVEDVTYKIYENARHELVNELCKETVFQDVIDWLNAKTR
Sequences:
>Translated_304_residues MNKEMKLKAADGLELHLHIWDEVEKPIGLIQIVHGMAEHGARYDLFAKRLNQAGYIVVADDHRGFGKSAINESYLGHLDG ETGFQNMIQDEVSVRTYIKENYPNLPYFIFAHSMGSFIIRTFMAQHQVDGVILSGSGLQPTALLKMGQIITKYRVKKDDK KRSGFLNKLAFWGYNKPFNENHRFSWLSRDVAVYEAYEKDPFCGPVVGTSGFFHNLFEVVKVSQQKETLESVPKDLPILL LSGSDDPVGHFGKDTPKIALALEKAGVEDVTYKIYENARHELVNELCKETVFQDVIDWLNAKTR >Mature_304_residues MNKEMKLKAADGLELHLHIWDEVEKPIGLIQIVHGMAEHGARYDLFAKRLNQAGYIVVADDHRGFGKSAINESYLGHLDG ETGFQNMIQDEVSVRTYIKENYPNLPYFIFAHSMGSFIIRTFMAQHQVDGVILSGSGLQPTALLKMGQIITKYRVKKDDK KRSGFLNKLAFWGYNKPFNENHRFSWLSRDVAVYEAYEKDPFCGPVVGTSGFFHNLFEVVKVSQQKETLESVPKDLPILL LSGSDDPVGHFGKDTPKIALALEKAGVEDVTYKIYENARHELVNELCKETVFQDVIDWLNAKTR
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34513; Mature: 34513
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEMKLKAADGLELHLHIWDEVEKPIGLIQIVHGMAEHGARYDLFAKRLNQAGYIVVAD CCCCEEEEECCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEC DHRGFGKSAINESYLGHLDGETGFQNMIQDEVSVRTYIKENYPNLPYFIFAHSMGSFIIR CCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH TFMAQHQVDGVILSGSGLQPTALLKMGQIITKYRVKKDDKKRSGFLNKLAFWGYNKPFNE HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC NHRFSWLSRDVAVYEAYEKDPFCGPVVGTSGFFHNLFEVVKVSQQKETLESVPKDLPILL CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LSGSDDPVGHFGKDTPKIALALEKAGVEDVTYKIYENARHELVNELCKETVFQDVIDWLN EECCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AKTR CCCC >Mature Secondary Structure MNKEMKLKAADGLELHLHIWDEVEKPIGLIQIVHGMAEHGARYDLFAKRLNQAGYIVVAD CCCCEEEEECCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEC DHRGFGKSAINESYLGHLDGETGFQNMIQDEVSVRTYIKENYPNLPYFIFAHSMGSFIIR CCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH TFMAQHQVDGVILSGSGLQPTALLKMGQIITKYRVKKDDKKRSGFLNKLAFWGYNKPFNE HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC NHRFSWLSRDVAVYEAYEKDPFCGPVVGTSGFFHNLFEVVKVSQQKETLESVPKDLPILL CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LSGSDDPVGHFGKDTPKIALALEKAGVEDVTYKIYENARHELVNELCKETVFQDVIDWLN EECCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AKTR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA