| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872673
Identifier: 116872673
GI number: 116872673
Start: 1251844
End: 1252740
Strand: Direct
Name: 116872673
Synonym: lwe1257
Alternate gene names: NA
Gene position: 1251844-1252740 (Clockwise)
Preceding gene: 116872671
Following gene: 116872676
Centisome position: 44.48
GC content: 26.53
Gene sequence:
>897_bases ATGATGCGGGAAAATAAAATTTTAGGTCACACACTGAAAGAAATTCGTATAAATTGCAATTTAAAAGAACGGGATGTATA TGAGACAATTATGTCAAGAGCGCATTTATATCAGATAGAAAAAAATCAACAAATGCCATCTTGGGGAATAGTTACATCAA TATTACAAAAATTCACCATGAGTTTAGCTGAGTTTGAATATATTCACAATAATTATCAATTAGATTCAATTCAACAAGTA ATACAAGATTTCAAAGCAATCAAAACCTCCACTAATTCTCACGCTATCAATGCTTTAATAGAAAAAATAAATTCACTCAT AAAAAATGAAAAAAATGATTTTCTTATGGATGTCTCTTATGTGTTAAAAGCCTTAAATACTTTTCAACAAGAACAAAATT TTAAAAGATCTAGAGAAATTGTAAAACCAGTTTGGAATAGGTTAGAGAAAAAAGACGCATGGTTTTATAATGATTTACTA CTTATAACCAATATATTATATGCCTTTGATGACTTAACTATTCAACATATATTTGAACGATTAGTTGTATATATTAATAA GTATAAGAACTTTAACACTTCAAAAGAGCTATATATCAATATTCATTATAATTATGCAATATGTCTTAGAAATACTACAA CAGAGATAGATAAAATGGAAATAAATTTAAAGAAATCTAAAGAAGCTGCAAATCAAATAAATGATGTAATTACTGTACTA AGTTGTAGGTATTATTTGGCTGAAATATTATGGCATAAAGGTAATAAAGAAAAGGCGATGGAAGAAGTAAAACAAGTTTT TACTGTACTGAAAATTTTAGAGGAAAGTGAATTGCTTATAGATAAGCAAAATGATTGGATAGAAGTTAGCGGGATGAGTT TGGAAAATATATTTTAA
Upstream 100 bases:
>100_bases ATCATTGATATCATTTTTTCACCTCCCGACAATAAAATAGTAGCATAGATAAAAAGCTATTTTTAATTTTGCTTACAAAA ATAGACAAAGGGGCTAAATA
Downstream 100 bases:
>100_bases ATAAAGAACCGTATTACTTGACATAAATGAGGTATATTGCAAACAATTTAGGATTTTCTTGGAAGAACAAATAAATGCTG AATGATAAAATTATTTTAAG
Product: transcriptional regulator, putative
Products: NA
Alternate protein names: Transcriptional Activator; Transcription Regulator
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MMRENKILGHTLKEIRINCNLKERDVYETIMSRAHLYQIEKNQQMPSWGIVTSILQKFTMSLAEFEYIHNNYQLDSIQQV IQDFKAIKTSTNSHAINALIEKINSLIKNEKNDFLMDVSYVLKALNTFQQEQNFKRSREIVKPVWNRLEKKDAWFYNDLL LITNILYAFDDLTIQHIFERLVVYINKYKNFNTSKELYINIHYNYAICLRNTTTEIDKMEINLKKSKEAANQINDVITVL SCRYYLAEILWHKGNKEKAMEEVKQVFTVLKILEESELLIDKQNDWIEVSGMSLENIF
Sequences:
>Translated_298_residues MMRENKILGHTLKEIRINCNLKERDVYETIMSRAHLYQIEKNQQMPSWGIVTSILQKFTMSLAEFEYIHNNYQLDSIQQV IQDFKAIKTSTNSHAINALIEKINSLIKNEKNDFLMDVSYVLKALNTFQQEQNFKRSREIVKPVWNRLEKKDAWFYNDLL LITNILYAFDDLTIQHIFERLVVYINKYKNFNTSKELYINIHYNYAICLRNTTTEIDKMEINLKKSKEAANQINDVITVL SCRYYLAEILWHKGNKEKAMEEVKQVFTVLKILEESELLIDKQNDWIEVSGMSLENIF >Mature_298_residues MMRENKILGHTLKEIRINCNLKERDVYETIMSRAHLYQIEKNQQMPSWGIVTSILQKFTMSLAEFEYIHNNYQLDSIQQV IQDFKAIKTSTNSHAINALIEKINSLIKNEKNDFLMDVSYVLKALNTFQQEQNFKRSREIVKPVWNRLEKKDAWFYNDLL LITNILYAFDDLTIQHIFERLVVYINKYKNFNTSKELYINIHYNYAICLRNTTTEIDKMEINLKKSKEAANQINDVITVL SCRYYLAEILWHKGNKEKAMEEVKQVFTVLKILEESELLIDKQNDWIEVSGMSLENIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35443; Mature: 35443
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRENKILGHTLKEIRINCNLKERDVYETIMSRAHLYQIEKNQQMPSWGIVTSILQKFTM CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SLAEFEYIHNNYQLDSIQQVIQDFKAIKTSTNSHAINALIEKINSLIKNEKNDFLMDVSY HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH VLKALNTFQQEQNFKRSREIVKPVWNRLEKKDAWFYNDLLLITNILYAFDDLTIQHIFER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVYINKYKNFNTSKELYINIHYNYAICLRNTTTEIDKMEINLKKSKEAANQINDVITVL HHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCHHHHEECHHHHHHHHHHHHHHHHHH SCRYYLAEILWHKGNKEKAMEEVKQVFTVLKILEESELLIDKQNDWIEVSGMSLENIF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHCCC >Mature Secondary Structure MMRENKILGHTLKEIRINCNLKERDVYETIMSRAHLYQIEKNQQMPSWGIVTSILQKFTM CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SLAEFEYIHNNYQLDSIQQVIQDFKAIKTSTNSHAINALIEKINSLIKNEKNDFLMDVSY HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH VLKALNTFQQEQNFKRSREIVKPVWNRLEKKDAWFYNDLLLITNILYAFDDLTIQHIFER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVYINKYKNFNTSKELYINIHYNYAICLRNTTTEIDKMEINLKKSKEAANQINDVITVL HHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCHHHHEECHHHHHHHHHHHHHHHHHH SCRYYLAEILWHKGNKEKAMEEVKQVFTVLKILEESELLIDKQNDWIEVSGMSLENIF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA