| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872657
Identifier: 116872657
GI number: 116872657
Start: 1242218
End: 1242634
Strand: Direct
Name: 116872657
Synonym: lwe1241
Alternate gene names: NA
Gene position: 1242218-1242634 (Clockwise)
Preceding gene: 116872656
Following gene: 116872659
Centisome position: 44.14
GC content: 38.61
Gene sequence:
>417_bases ATGGTACAAAAAAATATCGTAGTAGAATCAGGAGTAAAAGTTTATAAGGATAAAACGTTCAAAAAAGTAGTTGCAGAGCT ACCTAAAGGCGCTATTTTTAAATACGAAAGCGGTTTTTGCGAGTTCAAAACTACGAAAGGTTACACAAATCGCGCAAACT GGACGTGTCCGGCTGTATCAGGCAGCTATGTTATTGCGCTAGCAAAAGTAACGCAAAAGCTTGCCGAAAAAGTTGGCGAT AAAGGAATATTTCAAGTTTCAAAAGGCAATATCATTCGCGTAGATCCTTCGAGCTTAAAAAACGGCTATGTGAATTGCGC TGTTTTCAACGACGTGTGGGAATGGGGCTTCAAGATTAAACTTGCAGATGTGAAACGATGCGAAACGTTAGCTTATAACT CAATAGCAAAATTATAG
Upstream 100 bases:
>100_bases ACAACAAAAAAGGGTTTTTAGAATTATGGTATACAAAGGATGGTTGGTATTACACAGCTAACTATTTCTTAAAATAAATT ATGAATCGGAGGCAACAAAG
Downstream 100 bases:
>100_bases TATACTGCCCTCGCATTTTGCGGGTTTTTTGTCAAAATGAAAAAGGAGCCTTATTATTTGGCTCCTTTTCAAGTAATTGG GAGGAAGTAATAATTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MVQKNIVVESGVKVYKDKTFKKVVAELPKGAIFKYESGFCEFKTTKGYTNRANWTCPAVSGSYVIALAKVTQKLAEKVGD KGIFQVSKGNIIRVDPSSLKNGYVNCAVFNDVWEWGFKIKLADVKRCETLAYNSIAKL
Sequences:
>Translated_138_residues MVQKNIVVESGVKVYKDKTFKKVVAELPKGAIFKYESGFCEFKTTKGYTNRANWTCPAVSGSYVIALAKVTQKLAEKVGD KGIFQVSKGNIIRVDPSSLKNGYVNCAVFNDVWEWGFKIKLADVKRCETLAYNSIAKL >Mature_138_residues MVQKNIVVESGVKVYKDKTFKKVVAELPKGAIFKYESGFCEFKTTKGYTNRANWTCPAVSGSYVIALAKVTQKLAEKVGD KGIFQVSKGNIIRVDPSSLKNGYVNCAVFNDVWEWGFKIKLADVKRCETLAYNSIAKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15369; Mature: 15369
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQKNIVVESGVKVYKDKTFKKVVAELPKGAIFKYESGFCEFKTTKGYTNRANWTCPAVS CCCCCEEECCCCEEHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCEECCCCC GSYVIALAKVTQKLAEKVGDKGIFQVSKGNIIRVDPSSLKNGYVNCAVFNDVWEWGFKIK CCCEEHHHHHHHHHHHHHCCCCEEEECCCCEEEECHHHHCCCEEEEEEECCHHHCCCEEE LADVKRCETLAYNSIAKL ECCHHHHHHHHHHHHHCC >Mature Secondary Structure MVQKNIVVESGVKVYKDKTFKKVVAELPKGAIFKYESGFCEFKTTKGYTNRANWTCPAVS CCCCCEEECCCCEEHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCEECCCCC GSYVIALAKVTQKLAEKVGDKGIFQVSKGNIIRVDPSSLKNGYVNCAVFNDVWEWGFKIK CCCEEHHHHHHHHHHHHHCCCCEEEECCCCEEEECHHHHCCCEEEEEEECCHHHCCCEEE LADVKRCETLAYNSIAKL ECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA